HelroG185435 (Helobdella robusta)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 HelroG185435 T325113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN

NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.743 0.743
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA

TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.743 0.743
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.743 0.743
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.743 0.743
Smad3
M09637_2.00
Mus musculus
BYAGMCWN

NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.743 0.743
SMAD3
M11283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.743 0.743
SMAD3
M11284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.743 0.743
SMAD3
M11285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP185435 SMAD 29 129

Links

Other SMAD family TFs
Other Helobdella robusta TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29889.m003394 Ricinus communis 29889.m003394 N 0.000
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.000
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.000
Bo00763s120 Brassica oleracea Bo00763s120 N 0.000
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.000
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.000
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.000
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.000
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.000
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.000
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.000
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.000
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.000
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.000
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.000
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.000
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.000
MDP0000133479 Malus domestica MDP0000133479 N 0.000
MDP0000314867 Malus domestica MDP0000314867 N 0.000
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.000
PK21594.1 Cannabis sativa PK21594.1 N 0.000
Pm008491 Prunus mume Pm008491 N 0.000
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.000
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.000
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.000
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.000
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.000
TCM_004927 Theobroma cacao TCM_004927 N 0.000
TCM_021492 Theobroma cacao TCM_021492 N 0.000
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.000
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.000