TELCIR_11814 (Teladorsagia circumcincta)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 TELCIR_11814 T325962_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN

NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.793 0.793
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_11814 SMAD 177 263

Links

Other SMAD family TFs
Other Teladorsagia circumcincta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_01923 Aegilops tauschii F775_01923 I 0.000
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.000
BRC1 Arabidopsis thaliana AT3G18550 I 0.000
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.000
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.000
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.000
Bo1g117490 Brassica oleracea Bo1g117490 I 0.000
Bo3g071560 Brassica oleracea Bo3g071560 I 0.000
Bo5g117410 Brassica oleracea Bo5g117410 N 0.000
Bra037579 Brassica rapa Bra037579 I 0.000
Bra001710 Brassica rapa Bra001710 I 0.000
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.000
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.000
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.000
Cla019282 Citrullus lanatus Cla019282 N 0.000
Cla018797 Citrullus lanatus Cla018797 N 0.000
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.000
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.000
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.000
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.000
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.000
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.000
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.000
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.000
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.000
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.000
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.000
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.000
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.000
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.000
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.000
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.000
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.000
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.000
MDP0000224810 Malus domestica MDP0000224810 N 0.000
MDP0000219838 Malus domestica MDP0000219838 N 0.000
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.000
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.000
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.000
OBART03G31290 Oryza barthii OBART03G31290 I 0.000
OBART09G10040 Oryza barthii OBART09G10040 I 0.000
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.000
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.000
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.000
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.000
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.000
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.000
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.000
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.000
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.000
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.000
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.000
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.000
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.000
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.000
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.000
TB1 Oryza sativa OS03G0706500 D 0.000
OS09G0410500 Oryza sativa OS09G0410500 I 0.000
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.000
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.000
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.000
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.000
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.000
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.000
30174.m008721 Ricinus communis 30174.m008721 I 0.000
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.000
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.000
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.000
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.000
Si038692m.g Setaria italica Si038692m.g I 0.000
Si033183m.g Setaria italica Si033183m.g I 0.000
Si015230m.g Setaria italica Si015230m.g I 0.000
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.000
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.000
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.000
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.000
TCM_012252 Theobroma cacao TCM_012252 I 0.000
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.000
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.000
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.000
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.000
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.000
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.000
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.000