COCSADRAFT_234458 (Bipolaris sorokiniana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 COCSADRAFT_234458 T327151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.624 0.522
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.494 0.362
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.494 0.362
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.484 0.319
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.484 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD61695 Sox 203 271

Links

Other Sox family TFs
Other Bipolaris sorokiniana TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000752101 Angiostrongylus cantonensis ACAC_0000752101 I 0.000
ACOC_0000580401 Angiostrongylus costaricensis ACOC_0000580401 I 0.000
ALUE_0001545901 Ascaris lumbricoides ALUE_0001545901 I 0.000
ANCCAN_00554 Ancylostoma caninum ANCCAN_00554 I 0.000
ANCCEY_12899 Ancylostoma ceylanicum ANCCEY_12899 I 0.000
ASU_04064 Ascaris suum ASU_04064 I 0.000
Bm4254 Brugia malayi Bm4254 I 0.000
BXY_0772600 Bursaphelenchus xylophilus BXY_0772600 I 0.000
CBG13548 Caenorhabditis briggsae CBG13548 I 0.000
CBG13549 Caenorhabditis briggsae CBG13549 D 0.000
CBN10937 Caenorhabditis brenneri CBN10937 I 0.000
CJA11149 Caenorhabditis japonica CJA11149 I 0.000
CJA18864 Caenorhabditis japonica CJA18864 I 0.000
CRE31380 Caenorhabditis remanei CRE31380 I 0.000
CRE31381 Caenorhabditis remanei CRE31381 I 0.000
DICVIV_08848 Dictyocaulus viviparus DICVIV_08848 I 0.000
egl-18 Caenorhabditis elegans WBGene00001186 I 0.000
elt-6 Caenorhabditis elegans WBGene00001253 D 0.000
EVEC_0001284001 Enterobius vermicularis EVEC_0001284001 I 0.000
GPLIN_000855200 Globodera pallida GPLIN_000855200 I 0.000
Hba_15007 Heterorhabditis bacteriophora Hba_15007 I 0.000
HCOI01886300 Haemonchus contortus HCOI01886300 I 0.000
L596_g25881 Steinernema carpocapsae L596_g25881 I 0.000
L889_g31947 Steinernema feltiae L889_g31947 I 0.000
L892_g6412 Steinernema scapterisci L892_g6412 I 0.000
L893_g28710 Steinernema glaseri L893_g28710 I 0.000
L898_g8209 Steinernema monticolum L898_g8209 I 0.000
LOAG_07460 Loa loa LOAG_07460 I 0.000
maker-nMf.1.1.scaf08707-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf08707-augustus-gene-0.3 I 0.000
Minc08374 Meloidogyne incognita Minc08374 I 0.000
nAv.1.0.1.g03924 Acanthocheilonema viteae nAv.1.0.1.g03924 I 0.000
NBR_0001940901 Nippostrongylus brasiliensis NBR_0001940901 I 0.000
nDi.2.2.2.g02293 Dirofilaria immitis nDi.2.2.2.g02293 I 0.000
NECAME_05031 Necator americanus NECAME_05031 I 0.000
nLs.2.1.2.g04395 Litomosoides sigmodontis nLs.2.1.2.g04395 I 0.000
nOo.2.0.1.g08948 Onchocerca ochengi nOo.2.0.1.g08948 I 0.000
nRc.2.0.1.g15145 Romanomermis culicivorax nRc.2.0.1.g15145 I 0.000
OESDEN_09249 Oesophagostomum dentatum OESDEN_09249 I 0.000
OFLC_0000492601 Onchocerca flexuosa OFLC_0000492601 I 0.000
PTRK_0001379700 Parastrongyloides trichosuri PTRK_0001379700 I 0.000
RSKR_0000556500 Rhabditophanes kr3021 RSKR_0000556500 I 0.000
SBAD_0000818101 Soboliphyme baturini SBAD_0000818101 I 0.000
scaffold1024-EXSNAP2012.4 Pristionchus exspectatus scaffold1024-EXSNAP2012.4 I 0.000
scaffold1033-EXSNAP2012.2 Pristionchus exspectatus scaffold1033-EXSNAP2012.2 I 0.000
SMUV_0001093901 Syphacia muris SMUV_0001093901 I 0.000
SPAL_0001590300 Strongyloides papillosus SPAL_0001590300 I 0.000
SSTP_0001171300 Strongyloides stercoralis SSTP_0001171300 I 0.000
SVE_0995400 Strongyloides venezuelensis SVE_0995400 I 0.000
TCLT_0000574501 Thelazia callipaeda TCLT_0000574501 I 0.000
WBGene00241875 Onchocerca volvulus WBGene00241875 I 0.000
WUBG_10387 Wuchereria bancrofti WUBG_10387 I 0.000