HMGB2 (Ochotona princeps)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSOPRG00000010124 T328750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.465 0.420
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000009246 Sox 94 162

Links

Other Sox family TFs
Other Ochotona princeps TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.441
F775_29723 Aegilops tauschii F775_29723 I 0.427
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.417
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.417
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.419
AALB010796 Anopheles albimanus AALB010796 N 0.433
ACHR003271 Anopheles christyi ACHR003271 I 0.474
ADAC005115 Anopheles darlingi ADAC005115 N 0.433
AEPI002536 Anopheles epiroticus AEPI002536 N 0.429
GB47837 Apis mellifera GB47837 N 0.421
ACEP16595 Atta cephalotes ACEP16595 I 0.472
ACEP19638 Atta cephalotes ACEP19638 I 0.443
Bm8632 Brugia malayi Bm8632 N 0.441
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.453
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.461
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.418
CJA04355 Caenorhabditis japonica CJA04355 N 0.416
CRE11852 Caenorhabditis remanei CRE11852 N 0.416
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.615
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.575
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.421
ENSCAFG00000032639 Canis familiaris ENSCAFG00000032639 N 0.465
ENSCAFG00000016282 Canis familiaris ENSCAFG00000016282 I 0.606
PV04_00198 Capronia semiimmersa PV04_00198 I 0.428
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.452
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.428
PV07_09313 Cladophialophora immunda PV07_09313 I 0.428
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.428
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.419
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I 0.420
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I 0.420
GLRG_01394 Colletotrichum graminicola GLRG_01394 I 0.420
CH063_04081 Colletotrichum higginsianum CH063_04081 I 0.420
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I 0.420
ENSDNOG00000035150 Dasypus novemcinctus ENSDNOG00000035150 N 0.498
ENSDNOG00000037677 Dasypus novemcinctus ENSDNOG00000037677 N 0.508
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.441
PV10_01993 Exophiala mesophila PV10_01993 I 0.428
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.428
ENSGMOG00000010503 Gadus morhua ENSGMOG00000010503 N 0.491
GGTG_01518 Gaeumannomyces graminis GGTG_01518 I 0.452
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.434
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.421
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.428
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.427
XP_002159252.1 Hydra magnipapillata XP_002159252.1 I 0.452
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.442
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.441
LOAG_08062 Loa loa LOAG_08062 N 0.441
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N 0.514
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.617
ENSMMUG00000010106 Macaca mulatta ENSMMUG00000010106 I 0.510
ENSMMUG00000002541 Macaca mulatta ENSMMUG00000002541 I 0.451
ENSMEUG00000004078 Macropus eugenii ENSMEUG00000004078 N 0.415
MGG_01641 Magnaporthe oryzae MGG_01641 I 0.420
MAPG_06737 Magnaporthe poae MAPG_06737 I 0.452
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.419
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.479
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.430
mgf024995m Mimulus guttatus mgf024995m I 0.428
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.461
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.202
NCU02819 Neurospora crassa NCU02819 D 0.465
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.465
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.465
SNAPOd2T00005164001 Oikopleura dioica SNAPOd2T00005164001 N 0.443
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.417
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.456
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.441
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.441
F503_04824 Ophiostoma piceae uamh F503_04824 I 0.416
ENSOGAG00000034886 Otolemur garnettii ENSOGAG00000034886 N 0.483
ENSOGAG00000034481 Otolemur garnettii ENSOGAG00000034481 N 0.615
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.627
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.707
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.454
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.498
PPA02261 Pristionchus pacificus PPA02261 N 0.498
PPA14042 Pristionchus pacificus PPA14042 N 0.415
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I 0.449
V499_08602 Pseudogymnoascus pannorum V499_08602 I 0.456
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.617
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.415
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.415
M408DRAFT_333748 Serendipita vermifera M408DRAFT_333748 N 0.424
M408DRAFT_332518 Serendipita vermifera M408DRAFT_332518 N 0.424
SINV22588 Solenopsis invicta SINV22588 N 0.421
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.465
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I 0.416
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.444
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.454
TC012866 Tribolium castaneum TC012866 N 0.434
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.427
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.427
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.427
ENSTBEG00000013604 Tupaia belangeri ENSTBEG00000013604 N 0.582
VDBG_04589 Verticillium albo atrum VDBG_04589 I 0.427
VDBG_04589 Verticillium alfalfae VDBG_04589 I 0.427
VDAG_04140 Verticillium dahliae VDAG_04140 I 0.427
VDAG_09161 Verticillium dahliae VDAG_09161 I 0.427
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.430