GB47837 (Apis mellifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GB47837 T330003_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GB47837-PA Sox 120 188

Links

Other Sox family TFs
Other Apis mellifera TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
1400010135 Ostreococcus tauri 1400010135 I 0.426
30170.m014386 Ricinus communis 30170.m014386 I 0.417
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.422
ACEP16621 Atta cephalotes ACEP16621 N 0.638
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.422
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.464
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.426
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.426
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.422
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.422
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.466
ASU_05994 Ascaris suum ASU_05994 N 0.457
ASU_09087 Ascaris suum ASU_09087 N 0.464
Bm8632 Brugia malayi Bm8632 N 0.445
Bra025350 Brassica rapa Bra025350 N 0.422
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.425
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.415
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I 0.417
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I 0.417
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I 0.417
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.486
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.417
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I 0.417
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.741
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I 0.417
Ciclev10026715m.g Citrus clementina Ciclev10026715m.g I 0.417
CJA04355 Caenorhabditis japonica CJA04355 N 0.460
Cla009093 Citrullus lanatus Cla009093 I 0.417
CRE11852 Caenorhabditis remanei CRE11852 N 0.454
Cucsa.323100 Cucumis sativus Cucsa.323100 I 0.417
D915_02473 Fasciola hepatica D915_02473 N 0.456
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.422
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.451
ECPE_0000536801 Echinostoma caproni ECPE_0000536801 N 0.446
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.437
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.421
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I 0.417
evm.TU.supercontig_26.174 Carica papaya evm.TU.supercontig_26.174 I 0.426
evm.TU.supercontig_365.4 Carica papaya evm.TU.supercontig_365.4 I 0.417
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.417
GLYMA04G01840 Glycine max GLYMA04G01840 I 0.417
GLYMA06G01970 Glycine max GLYMA06G01970 I 0.417
GLYMA09G33070 Glycine max GLYMA09G33070 I 0.427
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.427
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.417
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I 0.417
GRMZM2G066528 Zea mays GRMZM2G066528 I 0.446
GSMUA_Achr2G11060_001 Musa acuminata GSMUA_Achr2G11060_001 I 0.420
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.421
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.422
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.470
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.470
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.452
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.421
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.422
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.735
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.442
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.451
L889_g16198 Steinernema feltiae L889_g16198 N 0.444
L889_g6592 Steinernema feltiae L889_g6592 N 0.457
L889_g9094 Steinernema feltiae L889_g9094 N 0.448
L892_g19058 Steinernema scapterisci L892_g19058 N 0.451
L892_g23618 Steinernema scapterisci L892_g23618 N 0.444
L893_g23503 Steinernema glaseri L893_g23503 N 0.444
L893_g29974 Steinernema glaseri L893_g29974 N 0.451
L898_g4830 Steinernema monticolum L898_g4830 N 0.451
L898_g7743 Steinernema monticolum L898_g7743 N 0.444
LOAG_08062 Loa loa LOAG_08062 N 0.445
LPERR09G14820 Leersia perrieri LPERR09G14820 I 0.417
MDP0000275042 Malus domestica MDP0000275042 I 0.420
mgf024995m Mimulus guttatus mgf024995m I 0.434
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.424
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.445
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.422
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.445
NECAME_17555 Necator americanus NECAME_17555 N 0.422
NECAME_17981 Necator americanus NECAME_17981 N 0.422
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.445
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.445
OB09G25530 Oryza brachyantha OB09G25530 I 0.417
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.422
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.436
OMERI09G14100 Oryza meridionalis OMERI09G14100 I 0.417
ONIVA09G20030 Oryza nivara ONIVA09G20030 I 0.417
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.417
orange1.1g031973m.g Citrus sinensis orange1.1g031973m.g I 0.417
ORGLA09G0150800 Oryza glaberrima ORGLA09G0150800 I 0.417
ORUFI09G20440 Oryza rufipogon ORUFI09G20440 I 0.417
OS09G0551600 Oryza sativa OS09G0551600 I 0.417
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.419
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.436
Pavir.Bb02550 Panicum virgatum Pavir.Bb02550 I 0.436
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.417
PK08788.1 Cannabis sativa PK08788.1 N 0.422
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.465
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.429
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.451
Sb02g032140 Sorghum bicolor Sb02g032140 I 0.436
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.465
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.465
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.431
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.431
Si031512m.g Setaria italica Si031512m.g I 0.436
SINV22588 Solenopsis invicta SINV22588 N 0.741
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.423
SNAPOd2T00005164001 Oikopleura dioica SNAPOd2T00005164001 N 0.476
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.489
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.417
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.464
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.464
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.464
TCM_000068 Theobroma cacao TCM_000068 I 0.417
TCM_034406 Theobroma cacao TCM_034406 I 0.417
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.464
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.457
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.422
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.505
TRIUR3_27273 Triticum urartu TRIUR3_27273 I 0.417
TSTA_074230 Talaromyces stipitatus TSTA_074230 N 0.438
VIT_04s0044g00110 Vitis vinifera VIT_04s0044g00110 I 0.417
VIT_18s0122g01190 Vitis vinifera VIT_18s0122g01190 I 0.417
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.445