GLOINDRAFT_31865 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_31865 T330087_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ESA08307 Sox 1 40

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SOX2 Procavia capensis ENSPCAG00000003690 I 0.450
MESCA012239 Megaselia scalaris MESCA012239 I 0.460
sox-2 Caenorhabditis elegans WBGene00004949 I 0.426
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.443
SOX2 Felis catus ENSFCAG00000029205 I 0.450
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.426
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.439
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.426
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.457
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.439
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.426
Aan_R006397 Calypte anna Aan_R006397 N 0.439
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.447
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.439
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.439
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.450
Ca_14341 Cicer arietinum Ca_14341 N 0.473
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.439
AMEM007694 Anopheles merus AMEM007694 N 0.443
estExt_fgenesh1_kg.C_340020 Phytophthora capsici estExt_fgenesh1_kg.C_340020 N 0.420
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.426
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.419
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.426
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.417
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.443
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.442
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.426
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.426
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.422
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.508
UCREL1_237 Eutypa lata UCREL1_237 N 0.456
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.432
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N 0.418
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.439
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.439
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.439
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.439
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.415
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.422
CC1G_07924 Coprinopsis cinerea CC1G_07924 N 0.442
CBN25334 Caenorhabditis brenneri CBN25334 N 0.476
GLOINDRAFT_347803 Rhizophagus irregularis GLOINDRAFT_347803 N 0.424
GLOINDRAFT_373 Rhizophagus irregularis GLOINDRAFT_373 N 0.500
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.429
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.419
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.419
RPRC001038 Rhodnius prolixus RPRC001038 N 0.443
Phyra76402 Phytophthora ramorum Phyra76402 N 0.416
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.442
MESCA006364 Megaselia scalaris MESCA006364 N 0.443
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.445
M7I_1506 Glarea lozoyensis M7I_1506 N 0.472
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.419
GLOINDRAFT_98228 Rhizophagus irregularis GLOINDRAFT_98228 N 0.544
CBN19486 Caenorhabditis brenneri CBN19486 N 0.445