GLOINDRAFT_98228 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_98228 T330227_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ESA08592 Sox 1 41

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.544
GLOINDRAFT_373 Rhizophagus irregularis GLOINDRAFT_373 N 0.512
Ca_14341 Cicer arietinum Ca_14341 N 0.484
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.474
GLOINDRAFT_347803 Rhizophagus irregularis GLOINDRAFT_347803 N 0.468
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.441
sox-2 Caenorhabditis elegans WBGene00004949 I 0.439
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.439
CC1G_07924 Coprinopsis cinerea CC1G_07924 N 0.436
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N 0.429
Thhalv10015680m.g Eutrema salsugineum Thhalv10015680m.g N 0.428
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.425
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.423
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.422
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.422
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.419
maker-nMf.1.1.scaf02291-snap-gene-0.16 Meloidogyne floridensis maker-nMf.1.1.scaf02291-snap-gene-0.16 N 0.417
UCREL1_237 Eutypa lata UCREL1_237 N 0.416
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N 0.416
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.415