GLYMA02G25940 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA02G25940 T330262_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G25940.1 Sox 24 52

Links

Other Sox family TFs
Other Glycine max TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.419
Bra012244 Brassica rapa Bra012244 N 0.564
Bra016455 Brassica rapa Bra016455 N 0.560
CaO19.1730 Candida albicans CaO19.1730 N 0.478
CaO19.9298 Candida albicans CaO19.9298 N 0.478
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.444
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.416
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.475
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I 0.462
ENSORLG00000018700 Oryzias latipes ENSORLG00000018700 N 0.457
ENSTNIG00000011238 Tetraodon nigroviridis ENSTNIG00000011238 N 0.433
ENSTNIG00000019242 Tetraodon nigroviridis ENSTNIG00000019242 N 0.435
e_gw1.88.21.1 Fragilariopsis cylindrus e_gw1.88.21.1 N 0.486
GH23191 Drosophila grimshawi FBgn0130648 N 0.517
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.415
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.571
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.469
H101_08199 Trichophyton interdigitale H101_08199 N 0.514
HBP1 Sorex araneus ENSSARG00000007731 I 0.462
HBP1 Echinops telfairi ENSETEG00000018542 I 0.462
Hbp1 Mus musculus ENSMUSG00000002996 D 0.462
Hbp1 Dipodomys ordii ENSDORG00000010576 I 0.462
HBP1 Homo sapiens ENSG00000105856 D 0.462
L798_04020 Zootermopsis nevadensis L798_04020 N 0.428
L798_09360 Zootermopsis nevadensis L798_09360 N 0.428
Minc03634 Meloidogyne incognita Minc03634 N 0.495
Minc04648 Meloidogyne incognita Minc04648 N 0.495
Ocbimv22007316m.g Octopus bimaculoides Ocbimv22007316m.g N 0.462
Ogr19131 Ophisaurus gracilis Ogr19131 N 0.462
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.499
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.438
PK25712.1 Cannabis sativa PK25712.1 N 0.425
PPA10381 Pristionchus pacificus PPA10381 N 0.550
PredSwiss_ASS2010_3146.2 Pneumocystis carinii PredSwiss_ASS2010_3146.2 N 0.416
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.444
RO3G_14677 Rhizopus oryzae RO3G_14677 N 0.447
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N 0.433
Sjc_0095610 Schistosoma japonicum Sjc_0095610 N 0.445
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.416
SPOG_05006 Schizosaccharomyces cryophilus SPOG_05006 N 0.444
Traes_1DL_ED7FDC748 Triticum aestivum Traes_1DL_ED7FDC748 N 0.427
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N 0.433
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.505