H072_3206 (Dactylellina haptotyla)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 H072_3206 T330473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY

RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.614 0.536
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.507 0.377
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.507 0.377
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.484 0.304
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.484 0.304
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPS42829 Sox 235 303

Links

Other Sox family TFs
Other Dactylellina haptotyla TFs

306 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_04741 Aegilops tauschii F775_04741 N 0.000
MLOC_38843 Hordeum vulgare MLOC_38843 N 0.000
LPERR03G29910 Leersia perrieri LPERR03G29910 N 0.000
ORGLA03G0326300 Oryza glaberrima ORGLA03G0326300 N 0.000
OGLUM03G35340 Oryza glumaepatula OGLUM03G35340 N 0.000
OMERI03G32810 Oryza meridionalis OMERI03G32810 N 0.000
ONIVA03G37080 Oryza nivara ONIVA03G37080 N 0.000
OPUNC03G32620 Oryza punctata OPUNC03G32620 N 0.000
ORUFI03G37020 Oryza rufipogon ORUFI03G37020 N 0.000
Sb01g006850 Sorghum bicolor Sb01g006850 N 0.000
Traes_5BL_4DD00FF4B Triticum aestivum Traes_5BL_4DD00FF4B N 0.000
GRMZM2G177046 Zea mays GRMZM2G177046 N 0.000