CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG72245
(
Helobdella robusta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HelroG72245
T330560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP72245
Sox
11
73
PKGKTSAYAFFMQATRDEQKKNSGKPLSFLKFSKKASEKWKNLFDEDRKTYKKMAANDSVRYK
Links
Other
Sox
family TFs
Other
Helobdella robusta
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HelroG91764
Helobdella robusta
HelroG91764
N
0.521
HMGB1
Ornithorhynchus anatinus
ENSOANG00000011494
N
0.512
mgf006762m
Mimulus guttatus
mgf006762m
N
0.477
SMAR010283
Strigamia maritima
SMAR010283
N
0.477
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.471
TCM_014800
Theobroma cacao
TCM_014800
N
0.464
HCOI01913400
Haemonchus contortus
HCOI01913400
N
0.458
OESDEN_15244
Oesophagostomum dentatum
OESDEN_15244
N
0.458
HCOI01912700
Haemonchus contortus
HCOI01912700
N
0.458
ENSOANG00000000353
Ornithorhynchus anatinus
ENSOANG00000000353
N
0.445
gw1.17.00.287.1
Ostreococcus tauri
gw1.17.00.287.1
N
0.433
HelroG167607
Helobdella robusta
HelroG167607
N
0.431
ASTEI08849
Anopheles stephensi
ASTEI08849
N
0.427
ENSOGAG00000011763
Otolemur garnettii
ENSOGAG00000011763
N
0.423
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.420