HMPREF1624_06196 (Sporothrix schenckii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 HMPREF1624_06196 T330648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY

RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.632 0.609
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.451 0.319
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.451 0.319
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.441 0.362
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.441 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERS98023 Sox 230 298

Links

Other Sox family TFs
Other Sporothrix schenckii TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000214814 Malus domestica MDP0000214814 N 0.000
MDP0000498604 Malus domestica MDP0000498604 N 0.000
MDP0000721685 Malus domestica MDP0000721685 N 0.000
MDP0000854094 Malus domestica MDP0000854094 N 0.000
cassava44457.m1 Manihot esculenta cassava44457.m1 N 0.000
PRUPE_ppa008663mg Prunus persica PRUPE_ppa008663mg N 0.000
TCM_015787 Theobroma cacao TCM_015787 N 0.000
VIT_13s0106g00370 Vitis vinifera VIT_13s0106g00370 N 0.000