M422DRAFT_89750 (Sphaerobolus stellatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 M422DRAFT_89750 T331085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.456 0.362
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.456 0.362
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.456 0.362
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.456 0.362
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.456 0.362
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.439 0.333
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.439 0.333
Cic
M00195_2.00
Mus musculus
NNTGCTGABN

NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.416 0.304
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIJ38500 Sox 1 71

Links

Other Sox family TFs
Other Sphaerobolus stellatus TFs

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.000
TRIUR3_35152 Triticum urartu TRIUR3_35152 I 0.000
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I 0.000
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I 0.000
Si035639m.g Setaria italica Si035639m.g N 0.000
Sb02g043270 Sorghum bicolor Sb02g043270 N 0.000
OS07G0684800 Oryza sativa OS07G0684800 N 0.000
Pavir.Bb03733 Panicum virgatum Pavir.Bb03733 N 0.000
OS03G0327100 Oryza sativa OS03G0327100 N 0.000
ORUFI07G27640 Oryza rufipogon ORUFI07G27640 N 0.000
ORUFI03G16480 Oryza rufipogon ORUFI03G16480 N 0.000
ORGLA07G0210900 Oryza glaberrima ORGLA07G0210900 N 0.000
Traes_2AS_5466FDAF8 Triticum aestivum Traes_2AS_5466FDAF8 N 0.000
Traes_2AS_759EDDA47 Triticum aestivum Traes_2AS_759EDDA47 N 0.000
Traes_2AS_7AAACC26B Triticum aestivum Traes_2AS_7AAACC26B N 0.000
Traes_2BS_00566A85C Triticum aestivum Traes_2BS_00566A85C N 0.000
Traes_2DS_291916365 Triticum aestivum Traes_2DS_291916365 N 0.000
TRIUR3_20284 Triticum urartu TRIUR3_20284 N 0.000
TRIUR3_24111 Triticum urartu TRIUR3_24111 N 0.000
TRIUR3_24774 Triticum urartu TRIUR3_24774 N 0.000
Pavir.Ba00246 Panicum virgatum Pavir.Ba00246 N 0.000
ORGLA03G0152400 Oryza glaberrima ORGLA03G0152400 N 0.000
OPUNC07G25090 Oryza punctata OPUNC07G25090 N 0.000
MLOC_64057 Hordeum vulgare MLOC_64057 N 0.000
LPERR07G23450 Leersia perrieri LPERR07G23450 N 0.000
LPERR03G13930 Leersia perrieri LPERR03G13930 N 0.000
GSMUA_Achr3G18020_001 Musa acuminata GSMUA_Achr3G18020_001 N 0.000
GRMZM2G181605 Zea mays GRMZM2G181605 N 0.000
F775_15511 Aegilops tauschii F775_15511 N 0.000
BRADI1G17440 Brachypodium distachyon BRADI1G17440 N 0.000
BGIOSGA023698 Oryza indica BGIOSGA023698 N 0.000
MLOC_65400 Hordeum vulgare MLOC_65400 N 0.000
MLOC_65714 Hordeum vulgare MLOC_65714 N 0.000
OB07G32150 Oryza brachyantha OB07G32150 N 0.000
ONIVA07G26420 Oryza nivara ONIVA07G26420 N 0.000
ONIVA03G16900 Oryza nivara ONIVA03G16900 N 0.000
OMERI07G23300 Oryza meridionalis OMERI07G23300 N 0.000
OLONG_022063 Oryza longistaminata OLONG_022063 N 0.000
OGLUM07G26690 Oryza glumaepatula OGLUM07G26690 N 0.000
OGLUM03G16080 Oryza glumaepatula OGLUM03G16080 N 0.000
OBART07G26650 Oryza barthii OBART07G26650 N 0.000
OBART03G15920 Oryza barthii OBART03G15920 N 0.000
BGIOSGA010816 Oryza indica BGIOSGA010816 N 0.000