CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_85039
(
Melampsora laricipopulina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
MELLADRAFT_85039
T331241_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.437
0.493
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG08294
Sox
276
342
PEKPLSAYVMFSNQVREELKGQQISFTEIARLVGDRWKNLCPRLKDSIINRAAEAKNVWSLQMDQYK
Links
Other
Sox
family TFs
Other
Melampsora laricipopulina
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGTG_12120
Puccinia graminis
PGTG_12120
I
0.622
PGTG_10028
Puccinia graminis
PGTG_10028
I
0.622
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.575
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.552
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.548
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.536
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.522
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.506
LEMA_P000900.1
Leptosphaeria maculans
LEMA_P000900.1
N
0.492
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.492
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.492
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.486
SNOG_01716
Stagonospora nodorum
SNOG_01716
N
0.486
PV09_06887
Verruconis gallopava
PV09_06887
I
0.483
COCVIDRAFT_22007
Bipolaris victoriae
COCVIDRAFT_22007
N
0.481
SETTUDRAFT_168734
Setosphaeria turcica
SETTUDRAFT_168734
N
0.481
COCSADRAFT_342303
Bipolaris sorokiniana
COCSADRAFT_342303
N
0.481
COCC4DRAFT_59869
Bipolaris maydis
COCC4DRAFT_59869
N
0.481
PTRG_02598
Pyrenophora triticirepentis
PTRG_02598
N
0.481
COCMIDRAFT_6607
Bipolaris oryzae
COCMIDRAFT_6607
N
0.481
AB06937.1
Alternaria brassicicola
AB06937.1
N
0.481
estExt_fgenesh1_pg.C_150217
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_150217
N
0.481
COCCADRAFT_2680
Bipolaris zeicola
COCCADRAFT_2680
N
0.481
E5Q_03709
Mixia osmundae
E5Q_03709
N
0.480
PTT_13179
Pyrenophora teres
PTT_13179
N
0.479
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.478
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.478
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.478
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.471
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.469
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.468
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.467
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.466
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.464
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.464
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.464
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.464
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.464
PTT_17082
Pyrenophora teres
PTT_17082
I
0.464
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.464
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.464
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.464
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.464
gw1.16.190.1
Phycomyces blakesleeanus
gw1.16.190.1
N
0.463
UCRNP2_5474
Neofusicoccum parvum
UCRNP2_5474
N
0.452
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.447
MVLG_01270
Microbotryum violaceum
MVLG_01270
I
0.446
W97_04202
Coniosporium apollinis
W97_04202
I
0.443
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.441
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.439
COCCADRAFT_24603
Bipolaris zeicola
COCCADRAFT_24603
I
0.439
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.438
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.437
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.437
NCU02819
Neurospora crassa
NCU02819
D
0.437
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.437
MBM_02410
Marssonina brunnea
MBM_02410
I
0.437
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.437
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.437
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.437
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.437
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.437
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.437
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.436
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.436
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.436
PV09_06039
Verruconis gallopava
PV09_06039
N
0.432
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.432
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.429
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.428
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.427
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.418
BDDG_03827
Blastomyces dermatitidis
BDDG_03827
N
0.418
PVAR5_2976
Byssochlamys spectabilis
PVAR5_2976
N
0.415