CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phatr3_J45968
(
Phaeodactylum tricornutum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Phatr3_J45968
T331921_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phatr3_J45968.p1
Sox
74
143
PKRPLSAYNVFFQRERPRIYDESNGRIGFQELGKVIGHRWRSLDAKERRAYELVAGKDTIRYRKEMDVFE
Links
Other
Sox
family TFs
Other
Phaeodactylum tricornutum
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAJ_00874
Metarhizium majus
MAJ_00874
I
0.458
MAC_03215
Metarhizium acridum
MAC_03215
I
0.458
MAM_02065
Metarhizium album
MAM_02065
I
0.458
MANI_001749
Metarhizium anisopliae
MANI_001749
I
0.458
X797_004147
Metarhizium robertsii
X797_004147
I
0.458
MBR_03233
Metarhizium brunneum
MBR_03233
I
0.458
CPUR_07262
Claviceps purpurea
CPUR_07262
I
0.458
MGU_02963
Metarhizium guizhouense
MGU_02963
I
0.458
M378DRAFT_77996
Amanita muscaria
M378DRAFT_77996
I
0.451
gw1.9.300.1
Sporobolomyces roseus
gw1.9.300.1
I
0.448
PMAA_019170
Talaromyces marneffei
PMAA_019170
I
0.443
PMAA_019170
Penicillium marneffei
PMAA_019170
I
0.443
TSTA_027170
Talaromyces stipitatus
TSTA_027170
I
0.443
RHTO_03328
Rhodosporidium toruloides
RHTO_03328
I
0.442
JAAARDRAFT_49184
Jaapia argillacea
JAAARDRAFT_49184
I
0.437
PILCRDRAFT_812728
Piloderma croceum
PILCRDRAFT_812728
I
0.437
JL09_g4180
Pichia kudriavzevii
JL09_g4180
I
0.434
KNAG_0J02470
Kazachstania naganishii
KNAG_0J02470
I
0.434
M404DRAFT_63984
Pisolithus tinctorius
M404DRAFT_63984
I
0.434
PISMIDRAFT_678929
Pisolithus microcarpus
PISMIDRAFT_678929
I
0.434
M404DRAFT_29654
Pisolithus tinctorius
M404DRAFT_29654
I
0.434
SCLCIDRAFT_131403
Scleroderma citrinum
SCLCIDRAFT_131403
I
0.434
AWRI1499_3752
Brettanomyces bruxellensis
AWRI1499_3752
I
0.434
J056_004689
Wallemia ichthyophaga
J056_004689
I
0.429
Z519_01307
Cladophialophora bantiana
Z519_01307
I
0.427
fgenesh1_kg.sca_1_chr1_3_0000051
Nectria haematococca
fgenesh1_kg.sca_1_chr1_3_0000051
I
0.427
fgenesh3_kg.24__2__378_3_CCSY
Neurospora discreta
fgenesh3_kg.24__2__378_3_CCSY
I
0.427
fgenesh1_kg.C_scaffold_4000212
Cryphonectria parasitica
fgenesh1_kg.C_scaffold_4000212
I
0.427
NCU09995
Neurospora crassa
NCU09995
I
0.427
Z518_06904
Rhinocladiella mackenziei
Z518_06904
I
0.427
PV06_10198
Exophiala oligosperma
PV06_10198
I
0.427
PV07_11822
Cladophialophora immunda
PV07_11822
I
0.427
PV05_08806
Exophiala xenobiotica
PV05_08806
I
0.427
PV04_08099
Capronia semiimmersa
PV04_08099
I
0.427
PODANS_1_14230
Podospora anserina
PODANS_1_14230
I
0.427
fgenesh1_pg.00866_#_414
Aspergillus carbonarius
fgenesh1_pg.00866_#_414
I
0.427
PITC_061650
Penicillium italicum
PITC_061650
I
0.427
PAAG_01986
Paracoccidioides sp lutzii
PAAG_01986
I
0.427
PABG_02251
Paracoccidioides brasiliensis
PABG_02251
I
0.427
OIDMADRAFT_53375
Oidiodendron maius
OIDMADRAFT_53375
I
0.427
OCS_02580
Ophiocordyceps sinensis
OCS_02580
I
0.427
NEUTE1DRAFT_118965
Neurospora tetrasperma
NEUTE1DRAFT_118965
I
0.427
PCH_Pc13g09020
Penicillium rubens
PCH_Pc13g09020
I
0.427
PDE_04795
Penicillium oxalicum
PDE_04795
I
0.427
Pc13g09020
Penicillium chrysogenum
Pc13g09020
I
0.427
PFICI_00741
Pestalotiopsis fici
PFICI_00741
I
0.427
PEX1_089460
Penicillium expansum
PEX1_089460
I
0.427
PDIP_30290
Penicillium digitatum
PDIP_30290
I
0.427
PV08_09792
Exophiala spinifera
PV08_09792
I
0.427
PV10_02644
Exophiala mesophila
PV10_02644
I
0.427
U727_00431321111
Penicillium solitum
U727_00431321111
I
0.427
UCREL1_7266
Eutypa lata
UCREL1_7266
I
0.427
MCYG_05548
Microsporum canis
MCYG_05548
I
0.427
TRV_07738
Trichophyton verrucosum
TRV_07738
I
0.427
TRIVIDRAFT_217092
Trichoderma virens
TRIVIDRAFT_217092
I
0.427
UCRNP2_2405
Neofusicoccum parvum
UCRNP2_2405
I
0.427
UCRPA7_2040
Togninia minima
UCRPA7_2040
I
0.427
VDAG_03330
Verticillium dahliae
VDAG_03330
I
0.427
VDBG_06173
Verticillium alfalfae
VDBG_06173
I
0.427
V499_06692
Pseudogymnoascus pannorum
V499_06692
I
0.427
UV8b_6830
Ustilaginoidea virens
UV8b_6830
I
0.427
UREG_07427
Uncinocarpus reesii
UREG_07427
I
0.427
TRIREDRAFT_3007
Trichoderma reesei
TRIREDRAFT_3007
I
0.427
TRIATDRAFT_259074
Trichoderma atroviride
TRIATDRAFT_259074
I
0.427
S40288_08316
Stachybotrys chartarum
S40288_08316
I
0.427
SAPIO_CDS3210
Scedosporium apiospermum
SAPIO_CDS3210
I
0.427
S40285_00704
Stachybotrys chlorohalonata
S40285_00704
I
0.427
Z517_03232
Fonsecaea pedrosoi
Z517_03232
I
0.427
PV11_07328
Exophiala sideris
PV11_07328
I
0.427
SBOR_5988
Sclerotinia borealis
SBOR_5988
I
0.427
AOL_s00043g650
Arthrobotrys oligospora
AOL_s00043g650
I
0.427
THITE_126111
Thielavia terrestris
THITE_126111
I
0.427
TESG_06912
Trichophyton tonsurans
TESG_06912
I
0.427
SPBR_08754
Sporothrix brasiliensis
SPBR_08754
I
0.427
SMAC_04223
Sordaria macrospora
SMAC_04223
I
0.427
VHEMI02691
Torrubiella hemipterigena
VHEMI02691
I
0.427
NechaG73395
Fusarium solani
NechaG73395
I
0.427
EURHEDRAFT_457143
Aspergillus ruber
EURHEDRAFT_457143
I
0.427
F503_07006
Ophiostoma piceae uamh
F503_07006
I
0.427
CADAFLAG00002475
Aspergillus flavus
CADAFLAG00002475
I
0.427
EPUS_00081
Endocarpon pusillum
EPUS_00081
I
0.427
CTHT_0010300
Chaetomium thermophilum
CTHT_0010300
I
0.427
MYCTH_2296547
Myceliophthora thermophila
MYCTH_2296547
I
0.427
FFUJ_00897
Fusarium fujikuroi
FFUJ_00897
I
0.427
FPSE_00047
Fusarium pseudograminearum
FPSE_00047
I
0.427
FVEG_00840
Fusarium verticillioides
FVEG_00840
I
0.427
FOXG_00672
Fusarium oxysporum
FOXG_00672
I
0.427
FGRRES_00385
Fusarium graminearum
FGRRES_00385
I
0.427
ACLA_039500
Aspergillus clavatus
CADACLAG00003509
I
0.427
CSUB01_03820
Colletotrichum sublineola
CSUB01_03820
I
0.427
ACRE_009770
Acremonium chrysogenum
ACRE_009770
I
0.427
CH063_13936
Colletotrichum higginsianum
CH063_13936
I
0.427
CHGG_02718
Chaetomium globosum
CHGG_02718
I
0.427
CGGC5_4927
Colletotrichum gloeosporioides
CGGC5_4927
I
0.427
CFIO01_02023
Colletotrichum fioriniae
CFIO01_02023
I
0.427
CCM_02275
Cordyceps militaris
CCM_02275
I
0.427
Cob_05549
Colletotrichum orbiculare
Cob_05549
I
0.427
ATEG_04695
Aspergillus terreus
CADATEAG00010213
I
0.427
CPC735_006120
Coccidioides posadasii
CPC735_006120
I
0.427
AFUA_3G11610
Aspergillus fumigatus
CADAFUAG00005351
I
0.427
CADANGAG00002256
Aspergillus niger
CADANGAG00002256
I
0.427
ANIA_02885
Aspergillus nidulans
CADANIAG00010204
I
0.427
NFIA_065700
Neosartorya fischeri
CADNFIAG00006255
I
0.427
G647_02460
Cladophialophora carrionii
G647_02460
I
0.427
VDBG_06173
Verticillium albo atrum
VDBG_06173
I
0.427
MAPG_02686
Magnaporthe poae
MAPG_02686
I
0.427
A1O3_03664
Capronia epimyces
A1O3_03664
I
0.427
A1O5_02172
Cladophialophora psammophila
A1O5_02172
I
0.427
GGTG_09659
Gaeumannomyces graminis
GGTG_09659
I
0.427
MBM_05761
Marssonina brunnea
MBM_05761
I
0.427
ARB_02895
Arthroderma benhamiae
ARB_02895
I
0.427
MGYG_02637
Microsporum gypseum
MGYG_02637
I
0.427
MPH_02795
Macrophomina phaseolina
MPH_02795
I
0.427
CIMG_03667
Coccidioides immitis
CIMG_03667
I
0.427
MGG_04489
Magnaporthe oryzae
MGG_04489
I
0.427
MCYG_05548
Arthroderma otae
MCYG_05548
I
0.427
M7I_4892
Glarea lozoyensis
M7I_4892
I
0.427
A1O7_07623
Cladophialophora yegresii
A1O7_07623
I
0.427
H072_4754
Dactylellina haptotyla
H072_4754
I
0.427
H102_01953
Trichophyton rubrum
H102_01953
I
0.427
BDDG_06343
Blastomyces dermatitidis
BDDG_06343
I
0.427
GMDG_00086
Pseudogymnoascus destructans
GMDG_00086
I
0.427
GLRG_04072
Colletotrichum graminicola
GLRG_04072
I
0.427
HMPREF1624_01793
Sporothrix schenckii
HMPREF1624_01793
I
0.427
H105_01968
Trichophyton soudanense
H105_01968
I
0.427
BBA_04234
Beauveria bassiana
BBA_04234
I
0.427
HMPREF1120_01828
Exophiala dermatitidis
HMPREF1120_01828
I
0.427
HCBG_06756
Histoplasma capsulatum
HCBG_06756
I
0.427
Bcin11g05240
Botrytis cinerea
Bcin11g05240
I
0.427
CMQ_4428
Grosmannia clavigera
CMQ_4428
I
0.425
fgenesh2_pg.7_#_8
Fragilariopsis cylindrus
fgenesh2_pg.7_#_8
N
0.424
AB01906.1
Alternaria brassicicola
AB01906.1
I
0.422
e_gw1.5.923.1
Cochliobolus heterostrophus C5
e_gw1.5.923.1
I
0.422
SNOG_08374
Phaeosphaeria nodorum
SNOG_08374
I
0.422
PVAR5_3907
Byssochlamys spectabilis
PVAR5_3907
I
0.422
GSTUM_00001197001
Tuber melanosporum
GSTUM_00001197001
I
0.422
PTT_11280
Pyrenophora teres
PTT_11280
I
0.422
PTRG_08584
Pyrenophora triticirepentis
PTRG_08584
I
0.422
SETTUDRAFT_96271
Setosphaeria turcica
SETTUDRAFT_96271
I
0.422
COCVIDRAFT_100578
Bipolaris victoriae
COCVIDRAFT_100578
I
0.422
COCCADRAFT_86510
Bipolaris zeicola
COCCADRAFT_86510
I
0.422
COCC4DRAFT_60919
Bipolaris maydis
COCC4DRAFT_60919
I
0.422
COCMIDRAFT_90970
Bipolaris oryzae
COCMIDRAFT_90970
I
0.422
COCSADRAFT_98214
Bipolaris sorokiniana
COCSADRAFT_98214
I
0.422
SNOG_08374
Stagonospora nodorum
SNOG_08374
I
0.422
UHOR_03854
Ustilago hordei
UHOR_03854
I
0.418
Thaps6683
Thalassiosira pseudonana
Thaps6683
I
0.417