CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCLCIDRAFT_1214155
(
Scleroderma citrinum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCLCIDRAFT_1214155
T332482_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM63506
Sox
30
91
PKRQPTAYNLFVQAQMKEWKAKNPNAPIKEAMVEIGQLWRDAPENVNRGKEPKSRKPKAAAA
Links
Other
Sox
family TFs
Other
Scleroderma citrinum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CC1G_09089
Coprinopsis cinerea
CC1G_09089
N
0.503
GALMADRAFT_215335
Galerina marginata
GALMADRAFT_215335
I
0.487
GLOTRDRAFT_107384
Gloeophyllum trabeum
GLOTRDRAFT_107384
I
0.451
M413DRAFT_168289
Hebeloma cylindrosporum
M413DRAFT_168289
N
0.487
estExt_fgenesh3_kg.C_170031
Heterobasidion annosum
estExt_fgenesh3_kg.C_170031
I
0.492
HETIRDRAFT_439796
Heterobasidion irregulare
HETIRDRAFT_439796
I
0.492
HYDPIDRAFT_177430
Hydnomerulius pinastri
HYDPIDRAFT_177430
N
0.554
K443DRAFT_674317
Laccaria amethystina
K443DRAFT_674317
N
0.436
LACBIDRAFT_297819
Laccaria bicolor
LACBIDRAFT_297819
N
0.436
chd3
Oryzias latipes
ENSORLG00000007107
N
0.451
PAXINDRAFT_100855
Paxillus involutus
PAXINDRAFT_100855
N
0.683
PAXRUDRAFT_625911
Paxillus rubicundulus
PAXRUDRAFT_625911
N
0.720
PLICRDRAFT_179042
Plicaturopsis crispa
PLICRDRAFT_179042
I
0.491
CY34DRAFT_417575
Suillus luteus
CY34DRAFT_417575
I
0.561
ENSTNIG00000004346
Tetraodon nigroviridis
ENSTNIG00000004346
N
0.451
M407DRAFT_228275
Tulasnella calospora
M407DRAFT_228275
N
0.498