CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_03674
(
Phaeosphaeria nodorum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SNOG_03674
T332666_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.534
0.690
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_03674
Sox
126
183
PERPPSAYVIFSNQLSFTEIAKVVGERWQVLPTEERETCERQANTAKEKYYAELADYK
Links
Other
Sox
family TFs
Other
Phaeosphaeria nodorum
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy