CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
17678
(
Aureococcus anophagefferens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
17678
T333881_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
17678
Sox
11
79
PKGRRSAYIFFGNAKRAEVKELHPDFSLGDVGRELGARWKALSDDDKKPYAALATADAERYDREMAAYK
Links
Other
Sox
family TFs
Other
Aureococcus anophagefferens
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
72060
Aureococcus anophagefferens
72060
N
0.675
IGS.gm_15_00221
Chlorella NC64A
IGS.gm_15_00221
I
0.490
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.473
GSMUA_Achr2G19630_001
Musa acuminata
GSMUA_Achr2G19630_001
I
0.470
CORT_0E02670
Candida orthopsilosis
CORT_0E02670
I
0.454
GNLVRS01_PISO0N04523g
Millerozyma farinosa
GNLVRS01_PISO0N04523g
I
0.454
CPAG_02417
Candida parapsilosis
CPAG_02417
I
0.454
ENSMMUG00000002541
Macaca mulatta
ENSMMUG00000002541
I
0.450
ANIA_02885
Aspergillus nidulans
CADANIAG00010204
I
0.449
gww1.1.1.1342.1
Pichia stipitis
gww1.1.1.1342.1
I
0.447
CD36_41610
Candida dubliniensis
CD36_41610
I
0.447
PICST_23779
Scheffersomyces stipitis
PICST_23779
I
0.447
GNLVRS01_PISO0M04390g
Millerozyma farinosa
GNLVRS01_PISO0M04390g
I
0.447
BN7_5566
Wickerhamomyces ciferrii
BN7_5566
I
0.447
SPAPADRAFT_62621
Spathaspora passalidarum
SPAPADRAFT_62621
I
0.447
DEHA2D17710g
Debaryomyces hansenii
DEHA2D17710g
I
0.447
Kpol_1065p34
Vanderwaltozyma polyspora
Kpol_1065p34
I
0.445
PDK_20s1437671g003
Phoenix dactylifera
PDK_20s1437671g003
I
0.443
YALI0_C11671g
Yarrowia lipolytica
YALI0_C11671g
I
0.443
AMTR_s00078p00107740
Amborella trichopoda
AMTR_s00078p00107740
I
0.442
NCAS_0I01260
Naumovozyma castellii
NCAS_0I01260
I
0.436
e_gw1.1.2450.1
Mucor circinelloides
e_gw1.1.2450.1
I
0.436
Scas_Contig718.17
Saccharomyces castellii
Scas_Contig718.17
I
0.436
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.433
PFL0145c
Plasmodium falciparum
PFL0145c
I
0.430
RO3G_07751
Rhizopus oryzae
RO3G_07751
I
0.430
CNF04730
Cryptococcus neoformans
CNF04730
I
0.429
L804_02852
Cryptococcus gattii
L804_02852
I
0.429
PV09_01265
Verruconis gallopava
PV09_01265
I
0.428
e_gw1.7.444.1
Tremella mesenterica
e_gw1.7.444.1
I
0.428
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
0.427
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
0.427
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
0.427
AGOS_ADL310W
Ashbya gossypii
AGOS_ADL310W
I
0.427
Ecym_7459
Eremothecium cymbalariae
Ecym_7459
I
0.427
NCLIV_043670
Neospora caninum
NCLIV_043670
I
0.427
AACERI_AaceriADL310W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL310W
I
0.427
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
0.423
O9G_002262
Rozella allomycis
O9G_002262
I
0.422
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
0.422
PK18077.1
Cannabis sativa
PK18077.1
I
0.422
Kpol_376p1
Vanderwaltozyma polyspora
Kpol_376p1
I
0.420
DOTSEDRAFT_74007
Dothistroma septosporum
DOTSEDRAFT_74007
I
0.420
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
0.419
SSRP1
Arabidopsis thaliana
AT3G28730
I
0.419
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
0.419
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
0.419
FOMPIDRAFT_1026139
Fomitopsis pinicola
FOMPIDRAFT_1026139
I
0.417
U727_00431321111
Penicillium solitum
U727_00431321111
I
0.416
Pc13g09020
Penicillium chrysogenum
Pc13g09020
I
0.416
UREG_07427
Uncinocarpus reesii
UREG_07427
I
0.416
fgenesh1_pg.00866_#_414
Aspergillus carbonarius
fgenesh1_pg.00866_#_414
I
0.416
Z517_03232
Fonsecaea pedrosoi
Z517_03232
I
0.416
Z519_01307
Cladophialophora bantiana
Z519_01307
I
0.416
VHEMI02691
Torrubiella hemipterigena
VHEMI02691
I
0.416
Z518_06904
Rhinocladiella mackenziei
Z518_06904
I
0.416
PDIP_30290
Penicillium digitatum
PDIP_30290
I
0.416
CCM_02275
Cordyceps militaris
CCM_02275
I
0.416
NFIA_065700
Neosartorya fischeri
CADNFIAG00006255
I
0.416
CPC735_006120
Coccidioides posadasii
CPC735_006120
I
0.416
G647_02460
Cladophialophora carrionii
G647_02460
I
0.416
GGTG_09659
Gaeumannomyces graminis
GGTG_09659
I
0.416
CADANGAG00002256
Aspergillus niger
CADANGAG00002256
I
0.416
AFUA_3G11610
Aspergillus fumigatus
CADAFUAG00005351
I
0.416
A1O7_07623
Cladophialophora yegresii
A1O7_07623
I
0.416
A1O5_02172
Cladophialophora psammophila
A1O5_02172
I
0.416
BBA_04234
Beauveria bassiana
BBA_04234
I
0.416
ACLA_039500
Aspergillus clavatus
CADACLAG00003509
I
0.416
CADAFLAG00002475
Aspergillus flavus
CADAFLAG00002475
I
0.416
M7I_4892
Glarea lozoyensis
M7I_4892
I
0.416
MAPG_02686
Magnaporthe poae
MAPG_02686
I
0.416
PV07_11822
Cladophialophora immunda
PV07_11822
I
0.416
PV06_10198
Exophiala oligosperma
PV06_10198
I
0.416
PV08_09792
Exophiala spinifera
PV08_09792
I
0.416
PV10_02644
Exophiala mesophila
PV10_02644
I
0.416
PV11_07328
Exophiala sideris
PV11_07328
I
0.416
PV05_08806
Exophiala xenobiotica
PV05_08806
I
0.416
PV04_08099
Capronia semiimmersa
PV04_08099
I
0.416
PCH_Pc13g09020
Penicillium rubens
PCH_Pc13g09020
I
0.416
CIMG_03667
Coccidioides immitis
CIMG_03667
I
0.416
PEX1_089460
Penicillium expansum
PEX1_089460
I
0.416
PITC_061650
Penicillium italicum
PITC_061650
I
0.416
PVAR5_3907
Byssochlamys spectabilis
PVAR5_3907
I
0.416