e_gw1.16.345.1 (Neurospora discreta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 e_gw1.16.345.1 T333968_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.420 0.508
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.420 0.508
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.420 0.508
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.420 0.508
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.420 0.508
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.16.345.1 Sox 1 63

Links

Other Sox family TFs
Other Neurospora discreta TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mycgr3G33619 Zymoseptoria tritici Mycgr3G33619 N 0.650
NEUTE1DRAFT_123419 Neurospora tetrasperma NEUTE1DRAFT_123419 I 0.632
NCU03481 Neurospora crassa NCU03481 I 0.632
MYCTH_2070581 Myceliophthora thermophila MYCTH_2070581 N 0.620
W97_07151 Coniosporium apollinis W97_07151 N 0.583
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.561
Bcin09g02870 Botrytis cinerea Bcin09g02870 I 0.558
MBM_09015 Marssonina brunnea MBM_09015 I 0.552
SBOR_3594 Sclerotinia borealis SBOR_3594 I 0.547
estExt_fgenesh1_pg.C_20723 Cryphonectria parasitica estExt_fgenesh1_pg.C_20723 I 0.546
VDAG_07007 Verticillium dahliae VDAG_07007 I 0.544
VDBG_05357 Verticillium alfalfae VDBG_05357 N 0.537
VDBG_05357 Verticillium albo atrum VDBG_05357 N 0.537
PODANS_6_4110 Podospora anserina PODANS_6_4110 N 0.528
PFICI_11445 Pestalotiopsis fici PFICI_11445 I 0.526
CHGG_08188 Chaetomium globosum CHGG_08188 I 0.520
PITC_068990 Penicillium italicum PITC_068990 I 0.518
U727_00431010161 Penicillium solitum U727_00431010161 I 0.518
ATEG_03987 Aspergillus terreus CADATEAG00009198 I 0.517
EURHEDRAFT_373724 Aspergillus ruber EURHEDRAFT_373724 I 0.517
PVAR5_3110 Byssochlamys spectabilis PVAR5_3110 I 0.517
NFIA_105270 Neosartorya fischeri CADNFIAG00010303 I 0.517
CADAFLAG00002060 Aspergillus flavus CADAFLAG00002060 I 0.517
ACLA_049990 Aspergillus clavatus CADACLAG00004890 I 0.517
AFUA_4G10820 Aspergillus fumigatus CADAFUAG00008327 I 0.517
CADANGAG00004297 Aspergillus niger CADANGAG00004297 I 0.517
fgenesh1_pm.00609_#_235 Aspergillus carbonarius fgenesh1_pm.00609_#_235 I 0.517
DOTSEDRAFT_67720 Dothistroma septosporum DOTSEDRAFT_67720 I 0.515
BAUCODRAFT_72427 Baudoinia compniacensis BAUCODRAFT_72427 I 0.515
ANIA_01962 Aspergillus nidulans CADANIAG00008622 I 0.512
PDE_06698 Penicillium oxalicum PDE_06698 I 0.512
MAM_00948 Metarhizium album MAM_00948 N 0.512
TSTA_077960 Talaromyces stipitatus TSTA_077960 I 0.511
EPUS_03386 Endocarpon pusillum EPUS_03386 I 0.509
CTHT_0006830 Chaetomium thermophilum CTHT_0006830 I 0.509
UCREL1_7053 Eutypa lata UCREL1_7053 I 0.508
MGG_03959 Magnaporthe oryzae MGG_03959 I 0.508
TRIATDRAFT_19824 Trichoderma atroviride TRIATDRAFT_19824 N 0.507
PMAA_040750 Talaromyces marneffei PMAA_040750 I 0.505
PMAA_040750 Penicillium marneffei PMAA_040750 I 0.505
PABG_03121 Paracoccidioides brasiliensis PABG_03121 I 0.504
V499_06181 Pseudogymnoascus pannorum V499_06181 I 0.501
GMDG_03362 Pseudogymnoascus destructans GMDG_03362 I 0.499
CH063_08155 Colletotrichum higginsianum CH063_08155 I 0.499
PAAG_02636 Paracoccidioides sp lutzii PAAG_02636 I 0.498
TRIVIDRAFT_19877 Trichoderma virens TRIVIDRAFT_19877 N 0.496
CGGC5_2884 Colletotrichum gloeosporioides CGGC5_2884 I 0.492
Cob_03892 Colletotrichum orbiculare Cob_03892 I 0.492
GLRG_08663 Colletotrichum graminicola GLRG_08663 I 0.492
F503_06490 Ophiostoma piceae uamh F503_06490 I 0.487
CSUB01_06997 Colletotrichum sublineola CSUB01_06997 N 0.486
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I 0.484
Pc22g06930 Penicillium chrysogenum Pc22g06930 I 0.484
fgeneshN1_pm.sca_3_chr4_2_0000013 Nectria haematococca fgeneshN1_pm.sca_3_chr4_2_0000013 I 0.483
NechaG106035 Fusarium solani NechaG106035 I 0.483
MYCFIDRAFT_86029 Pseudocercospora fijiensis MYCFIDRAFT_86029 I 0.480
estExt_fgenesh1_pg.C_10913 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10913 I 0.480
SEPMUDRAFT_153151 Sphaerulina musiva SEPMUDRAFT_153151 I 0.480
ACRE_043870 Acremonium chrysogenum ACRE_043870 N 0.476
FPSE_06551 Fusarium pseudograminearum FPSE_06551 I 0.476
FGRRES_05151 Fusarium graminearum FGRRES_05151 I 0.476
AUEXF2481DRAFT_37338 Aureobasidium subglaciale AUEXF2481DRAFT_37338 I 0.472
M438DRAFT_346080 Aureobasidium pullulans M438DRAFT_346080 I 0.470
M437DRAFT_74676 Aureobasidium melanogenum M437DRAFT_74676 I 0.470
FVEG_04822 Fusarium verticillioides FVEG_04822 I 0.467
FFUJ_13386 Fusarium fujikuroi FFUJ_13386 I 0.467
FOXG_07900 Fusarium oxysporum FOXG_07900 I 0.467
PEX1_064750 Penicillium expansum PEX1_064750 N 0.466
MCOS_0000919201 Mesocestoides corti MCOS_0000919201 N 0.466
CIMG_12783 Coccidioides immitis CIMG_12783 I 0.466
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.466
CPC735_049570 Coccidioides posadasii CPC735_049570 I 0.466
BDDG_02246 Blastomyces dermatitidis BDDG_02246 I 0.465
HCBG_03514 Histoplasma capsulatum HCBG_03514 I 0.465
HCBG_03464 Histoplasma capsulatum HCBG_03464 I 0.465
OIDMADRAFT_143853 Oidiodendron maius OIDMADRAFT_143853 I 0.460
SPBR_09078 Sporothrix brasiliensis SPBR_09078 I 0.458
HCBG_05263 Histoplasma capsulatum HCBG_05263 I 0.456
YALI0_B02266g Yarrowia lipolytica YALI0_B02266g I 0.455
GLOINDRAFT_51431 Rhizophagus irregularis GLOINDRAFT_51431 I 0.455
OCS_05413 Ophiocordyceps sinensis OCS_05413 I 0.454
CPUR_06949 Claviceps purpurea CPUR_06949 I 0.454
PV09_07372 Verruconis gallopava PV09_07372 I 0.452
GSTUM_00008644001 Tuber melanosporum GSTUM_00008644001 I 0.451
X797_008883 Metarhizium robertsii X797_008883 I 0.450
MANI_017634 Metarhizium anisopliae MANI_017634 I 0.450
MBR_05099 Metarhizium brunneum MBR_05099 I 0.450
MAJ_07256 Metarhizium majus MAJ_07256 I 0.450
MGU_01572 Metarhizium guizhouense MGU_01572 I 0.450
MAC_07229 Metarhizium acridum MAC_07229 I 0.450
VHEMI05549 Torrubiella hemipterigena VHEMI05549 I 0.448
CCM_04586 Cordyceps militaris CCM_04586 I 0.448
UV8b_664 Ustilaginoidea virens UV8b_664 I 0.448
BBA_05443 Beauveria bassiana BBA_05443 I 0.448
TRIREDRAFT_54007 Trichoderma reesei TRIREDRAFT_54007 N 0.447
H101_00568 Trichophyton interdigitale H101_00568 I 0.445
TEQG_04869 Trichophyton equinum TEQG_04869 I 0.445
SS1G_05340 Sclerotinia sclerotiorum SS1G_05340 N 0.444
TDEL_0H02760 Torulaspora delbrueckii TDEL_0H02760 I 0.442
MVLG_01557 Microbotryum violaceum MVLG_01557 I 0.440
CPC735_058040 Coccidioides posadasii CPC735_058040 I 0.438
CIMG_00406 Coccidioides immitis CIMG_00406 I 0.438
Myotis_brandtii_SOX12_10009951 Myotis brandtii Myotis_brandtii_SOX12_10009951 I 0.436
ARB_02276 Arthroderma benhamiae ARB_02276 N 0.436
MAT2 Aspergillus nidulans CADANIAG00005695 I 0.436
GGTG_04596 Gaeumannomyces graminis GGTG_04596 I 0.434
SAPIO_CDS2868 Scedosporium apiospermum SAPIO_CDS2868 I 0.433
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I 0.432
UREG_05111 Uncinocarpus reesii UREG_05111 I 0.432
GLOINDRAFT_62801 Rhizophagus irregularis GLOINDRAFT_62801 N 0.432
OCS_06292 Ophiocordyceps sinensis OCS_06292 I 0.431
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.430
TRV_04977 Trichophyton verrucosum TRV_04977 N 0.430
GLOINDRAFT_44333 Rhizophagus irregularis GLOINDRAFT_44333 I 0.429
CMQ_1586 Grosmannia clavigera CMQ_1586 I 0.428
A1O3_06089 Capronia epimyces A1O3_06089 I 0.427
HMPREF1120_08862 Exophiala dermatitidis HMPREF1120_08862 I 0.426
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I 0.425
AB07238.1 Alternaria brassicicola AB07238.1 I 0.425
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I 0.425
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I 0.425
SNOG_07773 Stagonospora nodorum SNOG_07773 I 0.425
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I 0.425
SPPG_01987 Spizellomyces punctatus SPPG_01987 I 0.424
PMAA_003200 Talaromyces marneffei PMAA_003200 I 0.424
PMAA_003200 Penicillium marneffei PMAA_003200 I 0.424
NDAI_0E03570 Naumovozyma dairenensis NDAI_0E03570 I 0.423
RO3G_10453 Rhizopus oryzae RO3G_10453 I 0.423
S40285_03081 Stachybotrys chlorohalonata S40285_03081 I 0.423
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I 0.423
Kpol_1062p60 Vanderwaltozyma polyspora Kpol_1062p60 I 0.423
DILT_0001316601 Diphyllobothrium latum DILT_0001316601 N 0.420
ROX1 Saccharomyces cerevisiae YPR065W D 0.420
KAFR_0H00950 Kazachstania africana KAFR_0H00950 I 0.420
PTRG_06171 Pyrenophora triticirepentis PTRG_06171 I 0.420
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I 0.419
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.419
KNAG_0H00720 Kazachstania naganishii KNAG_0H00720 I 0.418
AMAG_06979 Allomyces macrogynus AMAG_06979 I 0.417
S40288_01674 Stachybotrys chartarum S40288_01674 I 0.416