estExt_fgenesh2_pg.C_1860002 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh2_pg.C_1860002 T334017_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1860002 Sox 1283 1330

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.scaffold_112000058 Branchiostoma floridae fgenesh2_pg.scaffold_112000058 N 0.541
fgenesh2_pg.scaffold_207000008 Branchiostoma floridae fgenesh2_pg.scaffold_207000008 N 0.503
fgenesh2_pg.scaffold_179000049 Branchiostoma floridae fgenesh2_pg.scaffold_179000049 N 0.496
fgenesh2_pg.scaffold_67000039 Branchiostoma floridae fgenesh2_pg.scaffold_67000039 N 0.487
fgenesh2_pg.scaffold_300000030 Branchiostoma floridae fgenesh2_pg.scaffold_300000030 N 0.455
L898_g16221 Steinernema monticolum L898_g16221 N 0.450
fgenesh2_pg.scaffold_67000042 Branchiostoma floridae fgenesh2_pg.scaffold_67000042 N 0.431
PHACADRAFT_196209 Phanerochaete carnosa PHACADRAFT_196209 N 0.427
fgenesh2_pg.scaffold_188000104 Branchiostoma floridae fgenesh2_pg.scaffold_188000104 N 0.424
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.422
Thhalv10015680m.g Eutrema salsugineum Thhalv10015680m.g N 0.420