Gorai.005G106800 (Gossypium raimondii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Gorai.005G106800 T334535_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G106800.1 Sox 81 111
Gorai.005G106800.2 Sox 75 107

Links

Other Sox family TFs
Other Gossypium raimondii TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
36550 Aureococcus anophagefferens 36550 N 0.428
67303 Aureococcus anophagefferens 67303 N 0.561
68433 Aureococcus anophagefferens 68433 N 0.456
AAEL000771 Aedes aegypti AAEL000771 N 0.492
AALB009772 Anopheles albimanus AALB009772 N 0.416
AALB009867 Anopheles albimanus AALB009867 N 0.538
Aan_R006397 Calypte anna Aan_R006397 N 0.587
AATE015714 Anopheles atroparvus AATE015714 N 0.416
AATE016483 Anopheles atroparvus AATE016483 N 0.483
ACEP25851 Atta cephalotes ACEP25851 N 0.416
ACOM022799 Anopheles coluzzii ACOM022799 N 0.538
ACOM026653 Anopheles coluzzii ACOM026653 N 0.416
ACUA008827 Anopheles culicifacies ACUA008827 N 0.490
ACUA010594 Anopheles culicifacies ACUA010594 N 0.538
ACUA012732 Anopheles culicifacies ACUA012732 N 0.492
ADIR005631 Anopheles dirus ADIR005631 N 0.462
ADIR009661 Anopheles dirus ADIR009661 N 0.416
AEPI003629 Anopheles epiroticus AEPI003629 N 0.538
AEPI007652 Anopheles epiroticus AEPI007652 N 0.490
AEPI007948 Anopheles epiroticus AEPI007948 N 0.492
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.512
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.498
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.435
AFUN006689 Anopheles funestus AFUN006689 N 0.490
AFUN009317 Anopheles funestus AFUN009317 N 0.492
AFUN010198 Anopheles funestus AFUN010198 N 0.538
AGAP028091 Anopheles gambiae AGAP028091 N 0.492
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.538
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.529
AMAM004028 Anopheles maculatus AMAM004028 N 0.490
AMAM023617 Anopheles maculatus AMAM023617 N 0.492
AMEC007393 Anopheles melas AMEC007393 N 0.490
AMEC011653 Anopheles melas AMEC011653 N 0.492
AMEM002834 Anopheles merus AMEM002834 N 0.492
AMEM007694 Anopheles merus AMEM007694 N 0.444
AMIN001220 Anopheles minimus AMIN001220 N 0.490
AMIN009302 Anopheles minimus AMIN009302 N 0.538
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.586
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.538
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.416
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.492
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.462
BBX Sorex araneus ENSSARG00000008353 N 0.477
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.538
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.416
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.512
Ca_14341 Cicer arietinum Ca_14341 N 0.431
CBN19486 Caenorhabditis brenneri CBN19486 N 0.499
CBN25334 Caenorhabditis brenneri CBN25334 N 0.539
Cla016375 Citrullus lanatus Cla016375 N 0.476
CLEC006960 Cimex lectularius CLEC006960 N 0.538
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.507
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.498
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.538
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.490
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.538
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.490
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.490
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.469
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.567
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.485
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.571
EDI_065970 Entamoeba dispar EDI_065970 N 0.489
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.504
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.442
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.536
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.500
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.512
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.529
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.498
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.538
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.529
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.590
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.498
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.512
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.512
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.529
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.534
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.444
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.538
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.498
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.445
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.485
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.592
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.498
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.498
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.498
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.536
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.448
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.561
estExt_Genewise1.C_sca_3_chr4_2_00418 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00418 N 0.416
F443_09320 Phytophthora parasitica F443_09320 N 0.544
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.569
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.569
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.590
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.442
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.530
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.418
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.508
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.444
HelroG68905 Helobdella robusta HelroG68905 N 0.492
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.490
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.416
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.437
HMEL013676 Heliconius melpomene HMEL013676 N 0.490
Hmg20b Mus musculus ENSMUSG00000020232 D 0.572
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.567
ISCW001638 Ixodes scapularis ISCW001638 N 0.490
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.575
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.418
L798_00185 Zootermopsis nevadensis L798_00185 N 0.559
L798_05432 Zootermopsis nevadensis L798_05432 N 0.485
L798_12046 Zootermopsis nevadensis L798_12046 N 0.538
L898_g4879 Steinernema monticolum L898_g4879 N 0.498
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.418
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.527
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.538
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.490
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.445
LotgiG143673 Lottia gigantea LotgiG143673 N 0.490
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.453
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.564
M7I_1506 Glarea lozoyensis M7I_1506 N 0.521
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.483
MESCA006364 Megaselia scalaris MESCA006364 N 0.454
Minc18937 Meloidogyne incognita Minc18937 N 0.601
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.545
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.419
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.597
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.467
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.594
NechaG59892 Fusarium solani NechaG59892 N 0.416
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.580
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.498
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.529
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.492
orange1.1g036321m.g Citrus sinensis orange1.1g036321m.g N 0.447
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.498
PHUM433280 Pediculus humanus PHUM433280 N 0.492
Phyra76615 Phytophthora ramorum Phyra76615 N 0.536
Physo127875 Phytophthora sojae Physo127875 N 0.569
PK00252.1 Cannabis sativa PK00252.1 N 0.590
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.418
PPA11045 Pristionchus pacificus PPA11045 N 0.452
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.530
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.530
RPRC001038 Rhodnius prolixus RPRC001038 N 0.427
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.456
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.418
SINV16572 Solenopsis invicta SINV16572 N 0.492
SINV19749 Solenopsis invicta SINV19749 N 0.462
SMAR007058 Strigamia maritima SMAR007058 N 0.498
SOX10 Echinops telfairi ENSETEG00000012633 I 0.498
Sox17 Mus musculus ENSMUSG00000025902 D 0.529
SOX17 Sorex araneus ENSSARG00000009573 I 0.536
SOX18 Echinops telfairi ENSETEG00000001816 N 0.445
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.536
SOX18 Procavia capensis ENSPCAG00000015663 N 0.536
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.529
SOX2 Procavia capensis ENSPCAG00000003690 I 0.462
SOX2 Felis catus ENSFCAG00000029205 I 0.462
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.448
SOX8 Microcebus murinus ENSMICG00000011516 I 0.498
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.500
SOX8 Felis catus ENSFCAG00000004219 N 0.500
SOX8 Echinops telfairi ENSETEG00000015470 N 0.498
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.498
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.463
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.498
SOX9 Echinops telfairi ENSETEG00000020237 I 0.498
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.491
TC009856 Tribolium castaneum TC009856 N 0.492
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.458
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.602
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.539
Thhalv10015680m.g Eutrema salsugineum Thhalv10015680m.g N 0.442
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.425
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.525
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.492
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.420
UCREL1_237 Eutypa lata UCREL1_237 N 0.432
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.416
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.416
WUBG_10398 Wuchereria bancrofti WUBG_10398 N 0.419
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.521
yakG000714 Bos grunniens yakG000714 N 0.515
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.490
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.434