estExt_fgenesh1_pm.C_90262 (Phytophthora capsici)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh1_pm.C_90262 T335203_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_90262 Sox 4 71

Links

Other Sox family TFs
Other Phytophthora capsici TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_18818 Phytophthora parasitica F443_18818 N 0.711
fgenesh_scip_prom.46568.7826 Phytophthora kernoviae fgenesh_scip_prom.46568.7826 N 0.706
PITG_19530 Phytophthora infestans PITG_19530 N 0.660
maker-pve_contig_246-fgenesh-gene-0.10 Pythium vexans maker-pve_contig_246-fgenesh-gene-0.10 N 0.645
Phyra83406 Phytophthora ramorum Phyra83406 N 0.624
fgenesh_scip_prom.28083.11892 Phytophthora lateralis fgenesh_scip_prom.28083.11892 N 0.616
HpaG812832 Hyaloperonospora arabidopsidis HpaG812832 N 0.592
fgenesh_masked-piw_contig_977-abinit-gene-0.24 Pythium iwayamai fgenesh_masked-piw_contig_977-abinit-gene-0.24 N 0.585
maker-par_contig_2431-fgenesh-gene-0.3 Pythium arrhenomanes maker-par_contig_2431-fgenesh-gene-0.3 N 0.581
maker-pag1_scaffold_79-snap-gene-0.23 Pythium aphanidermatum maker-pag1_scaffold_79-snap-gene-0.23 N 0.562
maker-pir_contig_339-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_339-fgenesh-gene-0.5 N 0.558
PYU1_G004350 Pythium ultimum PYU1_G004350 N 0.539
SPRG_04796 Saprolegnia parasitica SPRG_04796 N 0.495
Physo143145 Phytophthora sojae Physo143145 N 0.460
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.419