genemark-nMf.1.1.scaf01854-processed-gene-0.4 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 genemark-nMf.1.1.scaf01854-processed-gene-0.4 T336319_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf01854-processed-gene-0.4-mRNA-1 Sox 197 265
genemark-nMf.1.1.scaf01854-processed-gene-0.4-mRNA-1 Sox 270 302

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10007727 Chelonia mydas Cmyd_10007727 N 0.568
CRE28162 Caenorhabditis remanei CRE28162 N 0.535
ASIS002444 Anopheles sinensis ASIS002444 N 0.456
CLEC004367 Cimex lectularius CLEC004367 N 0.456
LCUP017801 Lucilia cuprina LCUP017801 N 0.451
GH16346 Drosophila grimshawi FBgn0123817 N 0.422