TMUE_s0089001400 (Trichuris muris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 TMUE_s0089001400 T337193_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0089001400 Sox 1334 1399

Links

Other Sox family TFs
Other Trichuris muris TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AEPI010254 Anopheles epiroticus AEPI010254 N 0.457
AFUN005717 Anopheles funestus AFUN005717 N 0.459
AMAM014030 Anopheles maculatus AMAM014030 N 0.457
AMIN005634 Anopheles minimus AMIN005634 N 0.457
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.530
ASU_00939 Ascaris suum ASU_00939 N 0.579
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.543
Bm2393 Brugia malayi Bm2393 N 0.575
Bm7765 Brugia malayi Bm7765 N 0.440
Bm9369 Brugia malayi Bm9369 N 0.440
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.446
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.440
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.447
CBG11867 Caenorhabditis briggsae CBG11867 N 0.497
CBN07735 Caenorhabditis brenneri CBN07735 N 0.524
CBN15844 Caenorhabditis brenneri CBN15844 N 0.514
CBN31697 Caenorhabditis brenneri CBN31697 N 0.524
CJA03316 Caenorhabditis japonica CJA03316 N 0.497
CJA17191 Caenorhabditis japonica CJA17191 N 0.494
CJA30740 Caenorhabditis japonica CJA30740 N 0.497
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.457
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.457
CRE14258 Caenorhabditis remanei CRE14258 N 0.524
CRE28315 Caenorhabditis remanei CRE28315 N 0.480
D917_05046 Trichinella nativa D917_05046 N 0.623
D917_05048 Trichinella nativa D917_05048 N 0.629
D918_03887 Trichuris suis D918_03887 N 0.457
D918_05288 Trichuris suis D918_05288 N 0.714
D918_06015 Trichuris suis D918_06015 N 0.629
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.448
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.418
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.440
EFV52201 Trichinella spiralis EFV52201 N 0.471
EFV56090 Trichinella spiralis EFV56090 N 0.623
EFV56095 Trichinella spiralis EFV56095 N 0.629
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N 0.448
ENSCSAVG00000009396 Ciona savignyi ENSCSAVG00000009396 N 0.421
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.422
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.422
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.430
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.465
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.428
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.439
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.519
gw1.32.91.1 Bigelowiella natans gw1.32.91.1 N 0.436
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.465
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.422
ISCW005293 Ixodes scapularis ISCW005293 N 0.515
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.480
L798_00437 Zootermopsis nevadensis L798_00437 N 0.457
L889_g13125 Steinernema feltiae L889_g13125 N 0.460
L892_g13433 Steinernema scapterisci L892_g13433 I 0.480
L898_g14011 Steinernema monticolum L898_g14011 N 0.475
LOAG_11340 Loa loa LOAG_11340 N 0.440
LOAG_15875 Loa loa LOAG_15875 N 0.519
LotgiG176647 Lottia gigantea LotgiG176647 N 0.423
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.426
mgf006762m Mimulus guttatus mgf006762m N 0.446
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.423
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.456
Minc06622 Meloidogyne incognita Minc06622 N 0.456
Minc18174 Meloidogyne incognita Minc18174 N 0.428
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.440
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.440
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.575
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.575
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.440
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.575
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.440
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.575
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.440
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.524
pbrm1l Danio rerio ENSDARG00000077038 N 0.437
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.437
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.437
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.455
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.452
PHUM393920 Pediculus humanus PHUM393920 N 0.457
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.521
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.424
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.415
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.461
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.457
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.422
SMAR009325 Strigamia maritima SMAR009325 N 0.493
SMAR009610 Strigamia maritima SMAR009610 N 0.418
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.586
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.471
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.521
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.449
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.528
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.521
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.521
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.430
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.571
TCM_014800 Theobroma cacao TCM_014800 N 0.446
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.430
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.430
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.444
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.444
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.444
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.622
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.435
TOX2 Sorex araneus ENSSARG00000001080 N 0.422
TVAG_453060 Trichomonas vaginalis TVAG_453060 N 0.429
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.575
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.440
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.575
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.440