CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Stat6
(
Rattus norvegicus
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSRNOG00000025023
T337655_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in several processes, including cellular response to hydrogen peroxide; cellular response to reactive nitrogen species; and positive regulation of transcription by RNA polymerase II. Located in membrane raft and nucleus. Used to study asthma and renal fibrosis. Biomarker of asthma and myocarditis. Human ortholog(s) of this gene implicated in lipoid nephrosis; prostate carcinoma; and urinary schistosomiasis. Orthologous to human STAT6 (signal transducer and activator of transcription 6). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat6
M08173_2.00
Mus musculus
NNBTTCYWVRGAANN
NNTTCYBWRGAAVNN
ChIP-seq
Mathelier et al.(2014)
MA0520.1
0.963
0.963
Stat6
M09418_2.00
Mus musculus
BDBTTCHBDRGAAV
BTTCYHVDGAAVHV
Misc
Kulakovskiy et al.(2013)
STAT6_MOUSE.H11MO.0.A
0.963
0.963
Stat6
M09644_2.00
Mus musculus
TTCCNNAGAA
TTCTNNGGAA
Misc
Heinz et al.(2010)
Macrophage-Stat6_GSE38377
0.963
0.963
Stat6
M09643_2.00
Mus musculus
NNTTCYNNRGAA
TTCYNNRGAANN
Misc
Heinz et al.(2010)
CD4-Stat6_GSE22104
0.963
0.963
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000034983
STAT
273
526
FLVEKQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPLVRADMVTEKQARELSLPQGSGAGVESTGEIMNNTVPLENSVPGNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFMLGPNKHLIQLQALSLPLVVIVHGNQDNNAKATILWDNAFSEMDRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKIFNDNSLSIEAFQHRCVSWSQFNKEILLGRGFTFWQWFDGVLDLTK
ENSRNOP00000072301
STAT
273
526
FLVEKQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPLVRADMVTEKQARELSLPQGSGAGVESTGEIMNNTVPLENSVPGNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFMLGPNKHLIQLQALSLPLVVIVHGNQDNNAKATILWDNAFSEMDRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKIFNDNSLSIEAFQHRCVSWSQFNKEILLGRGFTFWQWFDGVLDLTK
Links
Other
STAT
family TFs
Other
Rattus norvegicus
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy