AGAP008563 (Anopheles gambiae)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 AGAP008563 T339285_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN

NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.844 0.857
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.818 0.720
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.818 0.720
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.818 0.720
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.818 0.720
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.818 0.720
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.818 0.720
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.818 0.720
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.818 0.720
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.818 0.720
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.818 0.720
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.818 0.720
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.818 0.720
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.818 0.720
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.818 0.720
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.818 0.720
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.818 0.720
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.818 0.720
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV

BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.737 0.582
TBX18
M11380_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.737 0.582
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN

NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.737 0.582
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGAP008563-PA T-box 260 453

Links

Other T-box family TFs
Other Anopheles gambiae TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27751.m000169 Ricinus communis 27751.m000169 N 0.000
Bo01495s010 Brassica oleracea Bo01495s010 N 0.000
Bo4g112570 Brassica oleracea Bo4g112570 N 0.000
Bo4g112590 Brassica oleracea Bo4g112590 N 0.000
Bo6g072500 Brassica oleracea Bo6g072500 N 0.000
Bo6g072510 Brassica oleracea Bo6g072510 N 0.000
Bo7g039170 Brassica oleracea Bo7g039170 N 0.000
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N 0.000
Bostr.20505s0056 Boechera stricta Bostr.20505s0056 N 0.000
Bra003261 Brassica rapa Bra003261 N 0.000
Bra014654 Brassica rapa Bra014654 N 0.000
Bra014657 Brassica rapa Bra014657 N 0.000
Bra014658 Brassica rapa Bra014658 N 0.000
Bra014971 Brassica rapa Bra014971 N 0.000
Cagra.0578s0027 Capsella grandiflora Cagra.0578s0027 N 0.000
Cagra.0578s0028 Capsella grandiflora Cagra.0578s0028 N 0.000
Carubv10017770m.g Capsella rubella Carubv10017770m.g N 0.000
Carubv10019130m.g Capsella rubella Carubv10019130m.g N 0.000
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N 0.000
MDP0000641681 Malus domestica MDP0000641681 N 0.000
Pm028948 Prunus mume Pm028948 N 0.000
Pm031098 Prunus mume Pm031098 N 0.000
Pm031103 Prunus mume Pm031103 N 0.000
POPTR_0016s03680 Populus trichocarpa POPTR_0016s03680 N 0.000
PRUPE_ppa018670mg Prunus persica PRUPE_ppa018670mg N 0.000
SapurV1A.0159s0010 Salix purpurea SapurV1A.0159s0010 N 0.000
SapurV1A.0196s0430 Salix purpurea SapurV1A.0196s0430 N 0.000
Thhalv10006189m.g Eutrema salsugineum Thhalv10006189m.g N 0.000
Thhalv10006191m.g Eutrema salsugineum Thhalv10006191m.g N 0.000
VIT_08s0007g05300 Vitis vinifera VIT_08s0007g05300 N 0.000