Tbx4 (Mus musculus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSMUSG00000000094 T340138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.667 1.000
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.667 1.000
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.899 0.934
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.899 0.934
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.899 0.934
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.899 0.934
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.899 0.934
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.899 0.934
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.899 0.934
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.899 0.934
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.899 0.934
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.790 0.621
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.785 0.654
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.785 0.654
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.785 0.654
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.785 0.654
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.785 0.654
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.785 0.654
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.785 0.654
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.785 0.654
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.783 0.637
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.783 0.637
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.783 0.637
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.783 0.637
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.783 0.637
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.773 0.676
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.773 0.670
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.752 0.637
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.752 0.637
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.741 0.610
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.741 0.610
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.741 0.610
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.741 0.610
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.741 0.610
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.741 0.610
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.741 0.610
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.741 0.610
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.741 0.610
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.741 0.610
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.741 0.610
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.741 0.610
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.741 0.610
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.741 0.610
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.741 0.610
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.741 0.610
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.741 0.610
For this family, TFs with SR scores > 0.734 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00831_2.00 T-box 19 201

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000000096 T-box 74 256
ENSMUSP00000103680 T-box 1 156
ENSMUSP00000103682 T-box 74 256

Links

Other T-box family TFs
Other Mus musculus TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006633 Ailuropoda melanoleuca ENSAMEG00000006633 I 0.000
Alligator_sinensis_CCG015770.1 Alligator sinensis Alligator_sinensis_CCG015770.1 I 0.000
ENSAPLG00000000926 Anas platyrhynchos ENSAPLG00000000926 I 0.000
CREB3L1 Anolis carolinensis ENSACAG00000004538 I 0.000
AALB009601 Anopheles albimanus AALB009601 N 0.000
AARA001918 Anopheles arabiensis AARA001918 N 0.000
AATE017814 Anopheles atroparvus AATE017814 N 0.000
ACHR001142 Anopheles christyi ACHR001142 N 0.000
ACOM034184 Anopheles coluzzii ACOM034184 N 0.000
ACUA005063 Anopheles culicifacies ACUA005063 N 0.000
ADAC009685 Anopheles darlingi ADAC009685 N 0.000
ADIR004482 Anopheles dirus ADIR004482 N 0.000
AEPI006229 Anopheles epiroticus AEPI006229 N 0.000
AFAF007309 Anopheles farauti AFAF007309 N 0.000
AFUN004803 Anopheles funestus AFUN004803 N 0.000
AGAP001464 Anopheles gambiae AGAP001464 N 0.000
AMAM004382 Anopheles maculatus AMAM004382 N 0.000
AMEC006548 Anopheles melas AMEC006548 N 0.000
AMEC006894 Anopheles melas AMEC006894 N 0.000
AMEM002225 Anopheles merus AMEM002225 N 0.000
AMIN002152 Anopheles minimus AMIN002152 N 0.000
AQUA006648 Anopheles quadriannulatus AQUA006648 N 0.000
ASIS007002 Anopheles sinensis ASIS007002 N 0.000
ASTEI05750 Anopheles stephensi ASTEI05750 N 0.000
GB54131 Apis mellifera GB54131 N 0.000
Afo_R002309 Aptenodytes forsteri Afo_R002309 I 0.000
ENSAMXG00000001763 Astyanax mexicanus ENSAMXG00000001763 I 0.000
ENSAMXG00000021541 Astyanax mexicanus ENSAMXG00000021541 I 0.000
ACEP17596 Atta cephalotes ACEP17596 N 0.000
ENSP00000288400-D1 Bos grunniens ENSP00000288400-D1 I 0.000
CREB3L1 Bos taurus ENSBTAG00000006143 I 0.000
estExt_fgenesh2_pg.C_2260058 Branchiostoma floridae estExt_fgenesh2_pg.C_2260058 I 0.000
estExt_fgenesh2_pg.C_290087 Branchiostoma floridae estExt_fgenesh2_pg.C_290087 I 0.000
estExt_fgenesh2_pg.C_9910002 Branchiostoma floridae estExt_fgenesh2_pg.C_9910002 N 0.000
estExt_fgenesh2_pg.C_2010091 Branchiostoma floridae estExt_fgenesh2_pg.C_2010091 N 0.000
CREB3L1 Callithrix jacchus ENSCJAG00000011726 I 0.000
Aan_R008906 Calypte anna Aan_R008906 I 0.000
Cflo_08743--XP_393982.2_APIME Camponotus floridanus Cflo_08743--XP_393982.2_APIME N 0.000
CREB3L1 Canis familiaris ENSCAFG00000009282 I 0.000
CREB3L1 Cavia porcellus ENSCPOG00000010073 I 0.000
Cmyd_10004342 Chelonia mydas Cmyd_10004342 I 0.000
ENSCSAG00000005658 Chlorocebus sabaeus ENSCSAG00000005658 I 0.000
CLEC006285 Cimex lectularius CLEC006285 N 0.000
creb/atf-a Ciona intestinalis ENSCING00000005364 I 0.000
ENSCSAVG00000008562 Ciona savignyi ENSCSAVG00000008562 I 0.000
csin104552 Clonorchis sinensis csin104552 I 0.000
KGM_16626 Danaus plexippus KGM_16626 N 0.000
creb3l1 Danio rerio ENSDARG00000015793 I 0.000
creb3l2 Danio rerio ENSDARG00000063563 I 0.000
CREB3L1 Dasypus novemcinctus ENSDNOG00000010500 I 0.000
CREB3L1 Equus caballus ENSECAG00000018306 I 0.000
CREB3L1 Felis catus ENSFCAG00000018794 I 0.000
ENSFALG00000006242 Ficedula albicollis ENSFALG00000006242 I 0.000
CREB3L1 Gallus gallus ENSGALG00000008393 I 0.000
Gfo_R014160 Geospiza fortis Gfo_R014160 I 0.000
CREB3L1 Gorilla gorilla ENSGGOG00000015181 I 0.000
HHAL007261-PA Halyomorpha halys HHAL007261-PA N 0.000
Hsal_06644--XP_393982.2_APIME Harpegnathos saltator Hsal_06644--XP_393982.2_APIME N 0.000
CREB3L1 Homo sapiens ENSG00000157613 D 0.000
ENSSTOG00000012697 Ictidomys tridecemlineatus ENSSTOG00000012697 I 0.000
ENSLOCG00000005600 Lepisosteus oculatus ENSLOCG00000005600 I 0.000
CREB3L1 Loxodonta africana ENSLAFG00000005092 I 0.000
LLOJ001811 Lutzomyia longipalpis LLOJ001811 N 0.000
ENSP00000288400 Macaca fascicularis ENSP00000288400 I 0.000
CREB3L1 Macaca mulatta ENSMMUG00000018571 I 0.000
CREB3L1 Meleagris gallopavo ENSMGAG00000011042 I 0.000
CREB3L1 Monodelphis domestica ENSMODG00000019888 I 0.000
ENSMPUG00000005639 Mustela putorius furo ENSMPUG00000005639 I 0.000
Creb3l1 Mus musculus ENSMUSG00000027230 I 0.000
Myotis_brandtii_CREB3L1_10025503 Myotis brandtii Myotis_brandtii_CREB3L1_10025503 I 0.000
CREB3L1 Myotis lucifugus ENSMLUG00000009820 I 0.000
ENSNLEG00000014012 Nomascus leucogenys ENSNLEG00000014012 I 0.000
Ocbimv22006104m.g Octopus bimaculoides Ocbimv22006104m.g I 0.000
Ogr17869 Ophisaurus gracilis Ogr17869 I 0.000
T265_10456 Opisthorchis viverrini T265_10456 I 0.000
ENSONIG00000015219 Oreochromis niloticus ENSONIG00000015219 I 0.000
CREB3L1 Oryctolagus cuniculus ENSOCUG00000004418 I 0.000
ENSORLG00000006015 Oryzias latipes ENSORLG00000006015 I 0.000
CREB3L1 Otolemur garnettii ENSOGAG00000008829 I 0.000
CREB3L1 Pan troglodytes ENSPTRG00000003543 I 0.000
ENSPANG00000015384 Papio anubis ENSPANG00000015384 I 0.000
PHUM399860 Pediculus humanus PHUM399860 N 0.000
ENSPSIG00000004461 Pelodiscus sinensis ENSPSIG00000004461 I 0.000
ENSPFOG00000007076 Poecilia formosa ENSPFOG00000007076 I 0.000
Pvit_08659 Pogona vitticeps Pvit_08659 I 0.000
CREB3L1 Procavia capensis ENSPCAG00000006313 I 0.000
CREB3L1 Pteropus vampyrus ENSPVAG00000016161 I 0.000
Creb3l1 Rattus norvegicus ENSRNOG00000005413 I 0.000
Sakowv30020964m.g Saccoglossus kowalevskii Sakowv30020964m.g I 0.000
ENSSHAG00000015230 Sarcophilus harrisii ENSSHAG00000015230 I 0.000
SINV13874 Solenopsis invicta SINV13874 N 0.000
CREB3L1 Sus scrofa ENSSSCG00000013263 I 0.000
CREB3L1 Taeniopygia guttata ENSTGUG00000010669 I 0.000
creb3l2 Takifugu rubripes ENSTRUG00000013114 I 0.000
ENSTRUG00000007014 Takifugu rubripes ENSTRUG00000007014 I 0.000
TC010778 Tribolium castaneum TC010778 N 0.000
CREB3L1 Tursiops truncatus ENSTTRG00000016515 I 0.000
CREB3L1 Vicugna pacos ENSVPAG00000008868 I 0.000
ENSXMAG00000004363 Xiphophorus maculatus ENSXMAG00000004363 I 0.000
L798_13615 Zootermopsis nevadensis L798_13615 N 0.000