CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG010961.1
(
Alligator sinensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Alligator_sinensis_CCG010961.1
T341002_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG010961.1
T-box
1
149
MFPVLKVSISGLDPNSMYSILLDFLAADGNRWKYVNGEWIPGGKPEPQSPSCVYIHPQSPNFGAHWMKAAITFSKVKLSNKMNGGGQIMLNSLHKYEPRVHIVKVGRPQKMISSFSFPETQFIAVTAYQNEEITALKIKHNPFAKAFLD
Links
Other
T-box
family TFs
Other
Alligator sinensis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSNLEG00000014917
Nomascus leucogenys
ENSNLEG00000014917
I
0.843
TBX19
Canis familiaris
ENSCAFG00000015268
I
0.843
ENSPANG00000021432
Papio anubis
ENSPANG00000021432
N
0.843
SFT2D2
Macaca mulatta
ENSMMUG00000005283
I
0.843
ENSMPUG00000006418
Mustela putorius furo
ENSMPUG00000006418
N
0.831
ENSFALG00000012218
Ficedula albicollis
ENSFALG00000012218
N
0.831
Ocbimv22020340m.g
Octopus bimaculoides
Ocbimv22020340m.g
N
0.827
ENSLACG00000008854
Latimeria chalumnae
ENSLACG00000008854
N
0.822
Myotis_brandtii_T_10014749
Myotis brandtii
Myotis_brandtii_T_10014749
N
0.817
T
Microcebus murinus
ENSMICG00000016122
N
0.816
HMEL002424
Heliconius melpomene
HMEL002424
N
0.809
ACEP25258
Atta cephalotes
ACEP25258
N
0.807
T
Myotis lucifugus
ENSMLUG00000011294
N
0.801
ENSAMXG00000005041
Astyanax mexicanus
ENSAMXG00000005041
N
0.795
YQE_08215
Dendroctonus ponderosae
YQE_08215
N
0.792
AFAF009298
Anopheles farauti
AFAF009298
N
0.790
MESCA010408
Megaselia scalaris
MESCA010408
N
0.767
Aan_R005441
Calypte anna
Aan_R005441
N
0.755