Gfo_R000255 (Geospiza fortis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Gfo_R000255 T341082_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX15
M03554_2.00
Homo sapiens
AGGTGTGAAATTCACACCT

AGGTGTGAATTTCACACCT
SELEX
Jolma et al.(2013)
TBX15_1
0.156 1.000
TBX15
M03555_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX15_2
0.156 1.000
TBX15
M05795_2.00
Homo sapiens
NRSGTGTBAN

NTVACACSYN
SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX
0.156 1.000
TBX15
M11378_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_01
0.156 1.000
TBX15
M11379_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_02
0.156 1.000
TBX15
M05796_2.00
Homo sapiens
NDSGYGTBAN

NTVACRCSHN
SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX
0.156 1.000
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000255 T-box 114 139

Links

Other T-box family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action