CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R010797
(
Geospiza fortis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Gfo_R010797
T341088_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R010797
T-box
4
182
ELLSPLCARRMFPTFQVKIFGMDPMADYMLLMDFVPVDDKRYRQVTNIWPVSRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRD
Links
Other
T-box
family TFs
Other
Geospiza fortis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008227
Calypte anna
Aan_R008227
N
0.814
ENSXMAG00000002370
Xiphophorus maculatus
ENSXMAG00000002370
N
0.814
ENSPSIG00000008075
Pelodiscus sinensis
ENSPSIG00000008075
N
0.814
TBX1
Canis familiaris
ENSCAFG00000014503
N
0.812
ENSECAG00000004398
Equus caballus
ENSECAG00000004398
N
0.812
TBX1
Cavia porcellus
ENSCPOG00000012532
N
0.812
ENSAMEG00000011544
Ailuropoda melanoleuca
ENSAMEG00000011544
N
0.812
Afo_R014491
Aptenodytes forsteri
Afo_R014491
N
0.807
TBX1
Oryctolagus cuniculus
ENSOCUG00000014466
N
0.804
ENSSHAG00000005122
Sarcophilus harrisii
ENSSHAG00000005122
N
0.763
SPU_006150
Strongylocentrotus purpuratus
SPU_006150
N
0.760
ISCW003117
Ixodes scapularis
ISCW003117
N
0.748