ANCCEY_07585 (Ancylostoma ceylanicum)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ANCCEY_07585 T341591_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.810 0.801
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.810 0.801
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.810 0.801
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.810 0.801
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.810 0.801
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.810 0.801
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.810 0.801
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.810 0.801
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.808 0.785
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.808 0.785
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.808 0.785
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.808 0.785
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.808 0.785
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.792 0.751
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.782 0.641
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.778 0.785
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.778 0.779
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.771 0.652
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.735 0.619
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.735 0.619
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.735 0.619
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.735 0.619
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.735 0.619
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.735 0.619
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.735 0.619
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.735 0.619
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.735 0.619
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCCEY_07585 T-box 57 237

Links

Other T-box family TFs
Other Ancylostoma ceylanicum TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28872.m000248 Ricinus communis 28872.m000248 I 0.000
anac053 Arabidopsis lyrata fgenesh2_kg.3__1085__AT3G10500.1 I 0.000
Aquca_030_00013 Aquilegia coerulea Aquca_030_00013 I 0.000
Bo1g143830 Brassica oleracea Bo1g143830 I 0.000
Bo3g002800 Brassica oleracea Bo3g002800 I 0.000
Bo9g180050 Brassica oleracea Bo9g180050 I 0.000
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.000
Bostr.22252s0010 Boechera stricta Bostr.22252s0010 I 0.000
Bra005804 Brassica rapa Bra005804 I 0.000
Bra009456 Brassica rapa Bra009456 I 0.000
Bra028790 Brassica rapa Bra028790 I 0.000
Bra034120 Brassica rapa Bra034120 I 0.000
Cagra.0834s0027 Capsella grandiflora Cagra.0834s0027 I 0.000
Cagra.9217s0021 Capsella grandiflora Cagra.9217s0021 I 0.000
Carubv10013370m.g Capsella rubella Carubv10013370m.g I 0.000
cassava22911.valid.m1 Manihot esculenta cassava22911.valid.m1 I 0.000
Ca_08371 Cicer arietinum Ca_08371 I 0.000
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.000
chr5.CM0909.760.nc Lotus japonicus chr5.CM0909.760.nc N 0.000
Ciclev10031147m.g Citrus clementina Ciclev10031147m.g I 0.000
Cla013942 Citrullus lanatus Cla013942 I 0.000
Cla020837 Citrullus lanatus Cla020837 I 0.000
Cla020838 Citrullus lanatus Cla020838 I 0.000
Cucsa.186150 Cucumis sativus Cucsa.186150 I 0.000
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.000
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.000
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.000
GLYMA20G33390 Glycine max GLYMA20G33390 N 0.000
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.000
Lus10017458.g Linum usitatissimum Lus10017458.g I 0.000
Lus10028824.g Linum usitatissimum Lus10028824.g N 0.000
MDP0000457996 Malus domestica MDP0000457996 I 0.000
MDP0000695714 Malus domestica MDP0000695714 I 0.000
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.000
NAC053 Arabidopsis thaliana AT3G10500 D 0.000
NAC078 Arabidopsis thaliana AT5G04410 D 0.000
NAC2 Arabidopsis lyrata scaffold_600382.1 I 0.000
orange1.1g007598m.g Citrus sinensis orange1.1g007598m.g I 0.000
PK11467.1 Cannabis sativa PK11467.1 I 0.000
Pm017550 Prunus mume Pm017550 I 0.000
POPTR_0008s03170 Populus trichocarpa POPTR_0008s03170 I 0.000
POPTR_0010s23650 Populus trichocarpa POPTR_0010s23650 I 0.000
SapurV1A.0213s0330 Salix purpurea SapurV1A.0213s0330 I 0.000
SapurV1A.0394s0050 Salix purpurea SapurV1A.0394s0050 I 0.000
TCM_043360 Theobroma cacao TCM_043360 I 0.000
Thhalv10013110m.g Eutrema salsugineum Thhalv10013110m.g I 0.000
Thhalv10020438m.g Eutrema salsugineum Thhalv10020438m.g I 0.000