ECANG7_07504 (Echinococcus canadensis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ECANG7_07504 T341676_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.793 0.758
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.793 0.758
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.793 0.758
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.793 0.758
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.793 0.758
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.793 0.758
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.793 0.758
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.793 0.758
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.793 0.758
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.793 0.758
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.793 0.758
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.793 0.758
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.793 0.758
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.793 0.758
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.793 0.758
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.793 0.758
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.793 0.758
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN

NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.778 0.692
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.748 0.637
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD

HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.738 0.566
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN

NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.738 0.566
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECANG7_07504 T-box 128 323

Links

Other T-box family TFs
Other Echinococcus canadensis TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_119147 Agaricus bisporus AGABI2DRAFT_119147 N 0.000
Moror_8689 Moniliophthora roreri Moror_8689 N 0.000
Moror_8690 Moniliophthora roreri Moror_8690 N 0.000
PAXINDRAFT_83451 Paxillus involutus PAXINDRAFT_83451 N 0.000
PAXRUDRAFT_9762 Paxillus rubicundulus PAXRUDRAFT_9762 N 0.000
PHACADRAFT_166850 Phanerochaete carnosa PHACADRAFT_166850 N 0.000
PHLGIDRAFT_297873 Phlebiopsis gigantea PHLGIDRAFT_297873 N 0.000
PILCRDRAFT_814348 Piloderma croceum PILCRDRAFT_814348 N 0.000
PISMIDRAFT_111995 Pisolithus microcarpus PISMIDRAFT_111995 N 0.000
PISMIDRAFT_12751 Pisolithus microcarpus PISMIDRAFT_12751 N 0.000
PLEOSDRAFT_168592 Pleurotus ostreatus PLEOSDRAFT_168592 N 0.000
SCHCODRAFT_256706 Schizophyllum commune SCHCODRAFT_256706 N 0.000
SCLCIDRAFT_25025 Scleroderma citrinum SCLCIDRAFT_25025 N 0.000
SERLA73DRAFT_187538 Serpula lacrymans SERLA73DRAFT_187538 N 0.000
M404DRAFT_145615 Pisolithus tinctorius M404DRAFT_145615 N 0.000
M378DRAFT_188501 Amanita muscaria M378DRAFT_188501 N 0.000
LACBIDRAFT_295375 Laccaria bicolor LACBIDRAFT_295375 N 0.000
BN946_scf184938.g39 Trametes cinnabarina BN946_scf184938.g39 N 0.000
CC1G_08430 Coprinopsis cinerea CC1G_08430 N 0.000
CY34DRAFT_803498 Suillus luteus CY34DRAFT_803498 N 0.000
DICSQDRAFT_39682 Dichomitus squalens DICSQDRAFT_39682 N 0.000
FIBRA_08804 Fibroporia radiculosa FIBRA_08804 N 0.000
FOMPIDRAFT_1029945 Fomitopsis pinicola FOMPIDRAFT_1029945 N 0.000
GALMADRAFT_148160 Galerina marginata GALMADRAFT_148160 N 0.000
GLOTRDRAFT_121103 Gloeophyllum trabeum GLOTRDRAFT_121103 N 0.000
GYMLUDRAFT_48883 Gymnopus luxurians GYMLUDRAFT_48883 N 0.000
GYMLUDRAFT_87175 Gymnopus luxurians GYMLUDRAFT_87175 N 0.000
HYDPIDRAFT_101365 Hydnomerulius pinastri HYDPIDRAFT_101365 N 0.000
JAAARDRAFT_199965 Jaapia argillacea JAAARDRAFT_199965 N 0.000
K443DRAFT_544152 Laccaria amethystina K443DRAFT_544152 N 0.000
fgenesh1_pg.C_scaffold_3000005 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000005 N 0.000