Bo8g114190 (Brassica oleracea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Bo8g114190 T342160_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.779 0.779
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.779 0.779
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.779 0.779
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.759 0.759
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.759 0.759
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.759 0.759
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.759 0.759
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.759 0.759
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.759 0.759
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.759 0.759
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.759 0.759
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.759 0.759
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g114190.1 TBP 23 83
Bo8g114190.1 TBP 90 179

Links

Other TBP family TFs
Other Brassica oleracea TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g007300 Brassica oleracea Bo2g007300 I 0.869
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.869
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I 0.869
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.855
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.855
Bra028725 Brassica rapa Bra028725 I 0.855
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.855
Bra005905 Brassica rapa Bra005905 I 0.850
mgf009543m Mimulus guttatus mgf009543m I 0.848
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.841
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.841
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.834
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.834
Thhalv10022351m.g Eutrema salsugineum Thhalv10022351m.g I 0.828
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.821
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.821
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.821
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.821
Bo3g003940 Brassica oleracea Bo3g003940 N 0.820
MGYG_01238 Microsporum gypseum MGYG_01238 I 0.807
MCYG_00725 Arthroderma otae MCYG_00725 I 0.807
H102_07668 Trichophyton rubrum H102_07668 I 0.807
OMERI10G08240 Oryza meridionalis OMERI10G08240 I 0.807
H105_07693 Trichophyton soudanense H105_07693 I 0.807
ORGLA10G0095800 Oryza glaberrima ORGLA10G0095800 I 0.807
OS10G0432300 Oryza sativa OS10G0432300 I 0.807
TESG_08364 Trichophyton tonsurans TESG_08364 I 0.807
CIMG_11148 Coccidioides immitis CIMG_11148 I 0.807
ORUFI10G11330 Oryza rufipogon ORUFI10G11330 I 0.807
CPC735_006990 Coccidioides posadasii CPC735_006990 I 0.807
ONIVA01G08510 Oryza nivara ONIVA01G08510 I 0.807
HCBG_06828 Histoplasma capsulatum HCBG_06828 I 0.807
BGIOSGA031868 Oryza indica BGIOSGA031868 I 0.807
BDDG_03170 Blastomyces dermatitidis BDDG_03170 I 0.800
TRV_02367 Trichophyton verrucosum TRV_02367 I 0.800
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I 0.800
PV04_08198 Capronia semiimmersa PV04_08198 I 0.800
e_gwh1.1.1.994.1 Pichia stipitis e_gwh1.1.1.994.1 I 0.800
PDE_04702 Penicillium oxalicum PDE_04702 I 0.800
PICST_38880 Scheffersomyces stipitis PICST_38880 I 0.800
LELG_01062 Lodderomyces elongisporus LELG_01062 I 0.793
SOCG_04191 Schizosaccharomyces octosporus SOCG_04191 I 0.793
H101_08207 Trichophyton interdigitale H101_08207 I 0.793
SPAPADRAFT_58486 Spathaspora passalidarum SPAPADRAFT_58486 I 0.793
PV10_01351 Exophiala mesophila PV10_01351 I 0.793
fgeneshPB_pg.12__294 Phycomyces blakesleeanus fgeneshPB_pg.12__294 I 0.793
tbp1 Schizosaccharomyces pombe SPAC29E6.08 I 0.793
UCREL1_11678 Eutypa lata UCREL1_11678 I 0.793
RO3G_16620 Rhizopus oryzae RO3G_16620 I 0.793
CPAG_04505 Candida parapsilosis CPAG_04505 I 0.793
SPOG_00351 Schizosaccharomyces cryophilus SPOG_00351 I 0.793
e_gw1.11.241.1 Mucor circinelloides e_gw1.11.241.1 I 0.793
e_gw1.1.2234.1 Mucor circinelloides e_gw1.1.2234.1 I 0.793
CORT_0A11870 Candida orthopsilosis CORT_0A11870 I 0.793
Z517_03367 Fonsecaea pedrosoi Z517_03367 I 0.786
Lus10031531.g Linum usitatissimum Lus10031531.g I 0.786
PV06_02313 Exophiala oligosperma PV06_02313 I 0.786
DACRYDRAFT_75233 Dacryopinax sp DACRYDRAFT_75233 I 0.786
PV05_09095 Exophiala xenobiotica PV05_09095 I 0.786
PV07_11953 Cladophialophora immunda PV07_11953 I 0.786
PV11_06323 Exophiala sideris PV11_06323 I 0.786
MDP0000289755 Malus domestica MDP0000289755 I 0.780
SELMODRAFT_37142 Selaginella moellendorffii SELMODRAFT_37142 I 0.779
SELMODRAFT_16705 Selaginella moellendorffii SELMODRAFT_16705 I 0.779
PISMIDRAFT_684343 Pisolithus microcarpus PISMIDRAFT_684343 I 0.779
MVLG_00350 Microbotryum violaceum MVLG_00350 I 0.779
SCLCIDRAFT_144717 Scleroderma citrinum SCLCIDRAFT_144717 I 0.779
Bra005902 Brassica rapa Bra005902 I 0.777
AGABI2DRAFT_44722 Agaricus bisporus AGABI2DRAFT_44722 I 0.772
Moror_8271 Moniliophthora roreri Moror_8271 I 0.772
FOMPIDRAFT_1017649 Fomitopsis pinicola FOMPIDRAFT_1017649 I 0.772
FIBRA_07233 Fibroporia radiculosa FIBRA_07233 I 0.772
RHTO_08020 Rhodosporidium toruloides RHTO_08020 I 0.772
DI09_319p10 Microsporidia sp DI09_319p10 I 0.772
GLOINDRAFT_79885 Rhizophagus irregularis GLOINDRAFT_79885 I 0.772
estExt_fgenesh3_kg.C_20416 Heterobasidion annosum estExt_fgenesh3_kg.C_20416 I 0.772
PV09_01314 Verruconis gallopava PV09_01314 I 0.772
SU7_0942 Saccharomyces arboricola SU7_0942 I 0.772
PILCRDRAFT_51869 Piloderma croceum PILCRDRAFT_51869 I 0.772
CMQ_1115 Grosmannia clavigera CMQ_1115 I 0.772
M378DRAFT_176716 Amanita muscaria M378DRAFT_176716 I 0.772
HETIRDRAFT_242765 Heterobasidion irregulare HETIRDRAFT_242765 I 0.772
GALMADRAFT_264138 Galerina marginata GALMADRAFT_264138 I 0.772
BN946_scf185000.g31 Trametes cinnabarina BN946_scf185000.g31 I 0.772
H311_04080 Anncaliia algerae H311_04080 I 0.772
SKUD_163604 Saccharomyces kudriavzevii SKUD_163604 I 0.772
PHLGIDRAFT_111859 Phlebiopsis gigantea PHLGIDRAFT_111859 I 0.772
SERLA73DRAFT_76226 Serpula lacrymans SERLA73DRAFT_76226 I 0.772
PHACADRAFT_256913 Phanerochaete carnosa PHACADRAFT_256913 I 0.772
gwh2.1.1035.1 Phanerochaete chrysosporium gwh2.1.1035.1 I 0.772
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.767
Sb01g017130 Sorghum bicolor Sb01g017130 I 0.766
J056_000874 Wallemia ichthyophaga J056_000874 I 0.766
WALSEDRAFT_33220 Wallemia sebi WALSEDRAFT_33220 I 0.766
Bo5g132530 Brassica oleracea Bo5g132530 I 0.760
Bra027434 Brassica rapa Bra027434 I 0.760
VCUG_02118 Vavraia culicis VCUG_02118 I 0.759
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.759
tbp Oryzias latipes ENSORLG00000010757 I 0.759
UREG_07344 Uncinocarpus reesii UREG_07344 I 0.759
THOM_0429 Trachipleistophora hominis THOM_0429 I 0.759
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I 0.759
TRIUR3_13880 Triticum urartu TRIUR3_13880 I 0.755
Bra011920 Brassica rapa Bra011920 I 0.754
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.754
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.754
Bo6g051360 Brassica oleracea Bo6g051360 I 0.754
Thhalv10021552m.g Eutrema salsugineum Thhalv10021552m.g I 0.754
TBP1 Arabidopsis lyrata fgenesh2_kg.3__1428__AT3G13445.1 I 0.754
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.752
A1Q1_08290 Trichosporon asahii A1Q1_08290 I 0.752
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.752
NAPIS_ORF01258 Nosema apis NAPIS_ORF01258 I 0.752
NAPIS_ORF00497 Nosema apis NAPIS_ORF00497 I 0.752
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.752
SPBR_06113 Sporothrix brasiliensis SPBR_06113 I 0.752
TC008403 Tribolium castaneum TC008403 I 0.752
TBPL2 Gallus gallus ENSGALG00000012145 I 0.752
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.752
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I 0.749
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I 0.749
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I 0.749
TBP2 Arabidopsis thaliana AT1G55520 I 0.749
TBP1 Arabidopsis thaliana AT3G13445 I 0.749
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.749
Cagra.0690s0017 Capsella grandiflora Cagra.0690s0017 I 0.749
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.749
Si038805m.g Setaria italica Si038805m.g I 0.749
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I 0.749
Carubv10014676m.g Capsella rubella Carubv10014676m.g I 0.749
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I 0.747
Si023295m.g Setaria italica Si023295m.g I 0.745
KGM_04261 Danaus plexippus KGM_04261 I 0.745
MCINX007129 Melitaea cinxia MCINX007129 I 0.745
GB47180 Apis mellifera GB47180 I 0.745
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.745
ACEP14716 Atta cephalotes ACEP14716 I 0.745
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.745
HMEL016424 Heliconius melpomene HMEL016424 I 0.745
PHUM533080 Pediculus humanus PHUM533080 I 0.745
PIIN_00750 Piriformospora indica PIIN_00750 I 0.745
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.743
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.743
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.743
Bra030855 Brassica rapa Bra030855 I 0.743
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.743
Bo3g185290 Brassica oleracea Bo3g185290 I 0.743
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.743
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.743
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.743
29950.m001154 Ricinus communis 29950.m001154 I 0.743
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.743
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I 0.743
OB03G33300 Oryza brachyantha OB03G33300 I 0.743
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.743
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.743
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.743
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.743
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.743
TRIUR3_20012 Triticum urartu TRIUR3_20012 I 0.739
F775_26897 Aegilops tauschii F775_26897 I 0.739
TBPL2 Canis familiaris ENSCAFG00000015052 I 0.738
GI18943 Drosophila mojavensis FBgn0141682 I 0.738
HHAL004028-PA Halyomorpha halys HHAL004028-PA I 0.738
OBART03G28150 Oryza barthii OBART03G28150 I 0.737
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.737
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.737
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.737
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.737
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.737
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.737
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I 0.737
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.737
PK11932.1 Cannabis sativa PK11932.1 I 0.737
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.737
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.737
OBART12G16890 Oryza barthii OBART12G16890 I 0.737
OS12G0580300 Oryza sativa OS12G0580300 I 0.737
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.737
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I 0.737
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.737
TBP2 Oryza sativa OS03G0657000 I 0.737
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.737
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.737
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.737
GLYMA03G04500 Glycine max GLYMA03G04500 I 0.731
TBPL2 Microcebus murinus ENSMICG00000000943 I 0.731
PRUPE_ppa011675mg Prunus persica PRUPE_ppa011675mg I 0.731
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I 0.731
GLYMA16G25450 Glycine max GLYMA16G25450 I 0.731
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.731
SMU15013179 Schmidtea mediterranea SMU15013179 I 0.731
Tal_R008176 Tyto alba Tal_R008176 I 0.731
K437DRAFT_258899 Tilletiaria anomala K437DRAFT_258899 I 0.731
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.731
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.731
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I 0.731
Tbp Mus musculus ENSMUSG00000014767 D 0.730
GLYMA18G44460 Glycine max GLYMA18G44460 I 0.725
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.724
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.724
TCM_026453 Theobroma cacao TCM_026453 I 0.723
mgf012506m Mimulus guttatus mgf012506m I 0.723
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.721
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.721
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.717
OB03G33310 Oryza brachyantha OB03G33310 I 0.713
LPERR10G07850 Leersia perrieri LPERR10G07850 I 0.713
GSMUA_Achr7G01480_001 Musa acuminata GSMUA_Achr7G01480_001 I 0.713
PK25605.1 Cannabis sativa PK25605.1 I 0.713
Pm000066 Prunus mume Pm000066 I 0.711
ENSOARG00000015944 Ovis aries ENSOARG00000015944 I 0.710
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.710
Aquca_124_00015 Aquilegia coerulea Aquca_124_00015 I 0.710
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I 0.707
BATDEDRAFT_90475 Batrachochytrium dendrobatidis BATDEDRAFT_90475 I 0.707
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I 0.707
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I 0.707
Traes_1BS_2CB2C53C1 Triticum aestivum Traes_1BS_2CB2C53C1 I 0.705
MLOC_50796 Hordeum vulgare MLOC_50796 I 0.705
Traes_1BL_2CB2C53C1 Triticum aestivum Traes_1BL_2CB2C53C1 I 0.705
TRIUR3_32346 Triticum urartu TRIUR3_32346 I 0.705
Traes_1AL_60B57FD46 Triticum aestivum Traes_1AL_60B57FD46 I 0.705
BRADI3G27190 Brachypodium distachyon BRADI3G27190 I 0.705
e_gw1.11.176.1 Naegleria gruberi e_gw1.11.176.1 I 0.703
ML03273a Mnemiopsis leidyi ML03273a I 0.703
Aqu1.225918 Amphimedon queenslandica Aqu1.225918 I 0.703
AWRI1499_4207 Brettanomyces bruxellensis AWRI1499_4207 I 0.701
XP_002490297.1 Pichia pastoris XP_002490297.1 I 0.701
PredSwiss_EST785.1 Pneumocystis carinii PredSwiss_EST785.1 I 0.701
CANTEDRAFT_116365 Candida tenuis CANTEDRAFT_116365 I 0.701
PredSwiss_ASS2010_1907.1 Pneumocystis carinii PredSwiss_ASS2010_1907.1 I 0.701
OGLUM10G10700 Oryza glumaepatula OGLUM10G10700 I 0.701
PNEG_00724 Pneumocystis murina PNEG_00724 I 0.701
SJAG_00421 Schizosaccharomyces japonicus SJAG_00421 I 0.701
e_gw1.13.259.1 Physcomitrella patens e_gw1.13.259.1 I 0.701
PAS_chr1-4_0183 Komagataella pastoris PAS_chr1-4_0183 I 0.701
OPUNC10G09380 Oryza punctata OPUNC10G09380 I 0.701
HPODL_01164 Ogataea parapolymorpha HPODL_01164 I 0.701
JL09_g2536 Pichia kudriavzevii JL09_g2536 I 0.701
Aquca_013_00902 Aquilegia coerulea Aquca_013_00902 I 0.701
F775_26235 Aegilops tauschii F775_26235 I 0.701