CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE29744
(
Caenorhabditis remanei
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CRE29744
T342230_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE29744
TBP
275
356
DIQIRNVVCNYTLPLHIDLRKLAMNTHNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSEEDCKRAARSIARHVQRV
CRE29744
TBP
383
466
MFQVNNVLATCRLPFGIKIEEVAAKYPSESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGASSEADVLEVLSKIYPIVLEF
Links
Other
TBP
family TFs
Other
Caenorhabditis remanei
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.964
CBG12345
Caenorhabditis briggsae
CBG12345
N
0.945
CJA12630
Caenorhabditis japonica
CJA12630
N
0.909
CJA31001
Caenorhabditis japonica
CJA31001
N
0.857
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
0.745
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.739
HCOI00597600
Haemonchus contortus
HCOI00597600
N
0.733
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
0.721
scaffold259-EXSNAP2012.8
Pristionchus exspectatus
scaffold259-EXSNAP2012.8
N
0.715
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
0.715
Ppa-tlf-1
Pristionchus pacificus
PPA12059
N
0.715
ASU_03242
Ascaris suum
ASU_03242
N
0.715
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
0.709