BGIOSGA028717 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA028717 T343714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.830 0.418
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA028717-PA TCP 86 224

Links

Other TCP family TFs
Other Oryza indica TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TB1 Oryza sativa OS03G0706500 D 0.830
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.875
Si015230m.g Setaria italica Si015230m.g I 0.909
Si033183m.g Setaria italica Si033183m.g I 0.927
Si038692m.g Setaria italica Si038692m.g I 0.826
TCM_012252 Theobroma cacao TCM_012252 I 0.837
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.903
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.912
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.910
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.896
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.918
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.840
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.833
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.825
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.859
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.855
OS09G0410500 Oryza sativa OS09G0410500 I 0.916
OS08G0432300 Oryza sativa OS08G0432300 I 0.983
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.916
Pm015499 Prunus mume Pm015499 I 0.833
Pm030202 Prunus mume Pm030202 I 0.825
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.920
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.923
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.886
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.892
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.824
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.826
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.868
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.859
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.875
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.833
30167.m000856 Ricinus communis 30167.m000856 I 0.826
30174.m008721 Ricinus communis 30174.m008721 I 0.867
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.852
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.864
mgf024687m Mimulus guttatus mgf024687m I 0.823
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.832
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.832
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.838
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.983
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.830
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.914
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.928
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.829
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.823
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.893
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.906
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.908
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.856
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.898
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.894
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.863
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.826
F775_01923 Aegilops tauschii F775_01923 I 0.914
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.918
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.840
Bra034010 Brassica rapa Bra034010 I 0.824
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.916
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.911
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.907
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.948
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.916
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.966
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.828
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.830
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.967
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.921
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.960
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.837
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.916
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.981
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.830
OBART09G10040 Oryza barthii OBART09G10040 I 0.916
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.830
OBART03G31290 Oryza barthii OBART03G31290 I 0.828
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.822
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.917
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.927
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.829
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.851
OBART08G15630 Oryza barthii OBART08G15630 N 0.954
MDP0000224810 Malus domestica MDP0000224810 N 0.823