ONIVA02G27620 (Oryza nivara)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ONIVA02G27620 T344139_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.983 0.991
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.982 0.955
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.953 0.589
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.953 0.589
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.952 0.580
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.946 0.509
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.946 0.509
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.946 0.509
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.946 0.509
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.945 0.500
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.942 0.482
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.939 0.518
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.938 0.473
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.931 0.509
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.931 0.509
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.931 0.455
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.931 0.446
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.931 0.473
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.929 0.482
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.929 0.464
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.929 0.464
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.929 0.464
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.929 0.455
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.929 0.455
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.929 0.491
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.928 0.482
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.928 0.482
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.928 0.482
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.928 0.482
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.928 0.473
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.925 0.438
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.923 0.455
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.923 0.438
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.862 0.455
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.862 0.455
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA02G27620.1 TCP 52 204

Links

Other TCP family TFs
Other Oryza nivara TFs

638 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB00260.1 Alternaria brassicicola AB00260.1 I 0.000
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.000
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.000
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I 0.000
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I 0.000
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I 0.000
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I 0.000
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I 0.000
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I 0.000
ATEG_04171 Aspergillus terreus CADATEAG00009984 D 0.000
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.000
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.000
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.000
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I 0.000
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I 0.000
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I 0.000
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I 0.000
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I 0.000
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.000
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I 0.000
CaO19.7017 Candida albicans CaO19.7017 I 0.000
CD36_70900 Candida dubliniensis CD36_70900 I 0.000
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.000
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.000
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.000
G210_2310 Candida maltosa G210_2310 I 0.000
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.000
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.000
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.000
CTRG_04888 Candida tropicalis CTRG_04888 I 0.000
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.000
CIMG_09634 Coccidioides immitis CIMG_09634 I 0.000
CPC735_023880 Coccidioides posadasii CPC735_023880 I 0.000
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I 0.000
DACRYDRAFT_108097 Dacryopinax sp DACRYDRAFT_108097 I 0.000
H072_1197 Dactylellina haptotyla H072_1197 I 0.000
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.000
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.000
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.000
EPUS_07220 Endocarpon pusillum EPUS_07220 I 0.000
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.000
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I 0.000
HCBG_03004 Histoplasma capsulatum HCBG_03004 I 0.000
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.000
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.000
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.000
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.000
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.000
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.000
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.000
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.000
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.000
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.000
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I 0.000
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.000
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.000
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.000
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.000
MCYG_03024 Microsporum canis MCYG_03024 I 0.000
MGYG_00197 Microsporum gypseum MGYG_00197 I 0.000
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.000
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.000
fgeneshMC_pg.10_#_259 Mucor circinelloides fgeneshMC_pg.10_#_259 I 0.000
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I 0.000
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.000
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.000
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I 0.000
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I 0.000
Pc18g00190 Penicillium chrysogenum Pc18g00190 I 0.000
PDIP_75510 Penicillium digitatum PDIP_75510 I 0.000
PEX1_077160 Penicillium expansum PEX1_077160 I 0.000
PITC_036250 Penicillium italicum PITC_036250 I 0.000
PMAA_076490 Penicillium marneffei PMAA_076490 I 0.000
PDE_04931 Penicillium oxalicum PDE_04931 I 0.000
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I 0.000
U727_00433932271 Penicillium solitum U727_00433932271 I 0.000
gw1.54.52.1 Phycomyces blakesleeanus gw1.54.52.1 I 0.000
fgeneshPB_pg.5__518 Phycomyces blakesleeanus fgeneshPB_pg.5__518 I 0.000
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.000
XP_002491722.1 Pichia pastoris XP_002491722.1 I 0.000
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.000
PIIN_05295 Piriformospora indica PIIN_05295 I 0.000
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I 0.000
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.000
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.000
RO3G_03673 Rhizopus oryzae RO3G_03673 I 0.000
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.000
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.000
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.000
YOX1 Saccharomyces cerevisiae YML027W D 0.000
YHP1 Saccharomyces cerevisiae YDR451C D 0.000
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.000
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.000
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.000
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.000
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.000
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.000
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I 0.000
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I 0.000
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I 0.000
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I 0.000
yox1 Schizosaccharomyces pombe SPBC21B10.13c D 0.000
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I 0.000
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.000
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.000
SPPG_01429 Spizellomyces punctatus SPPG_01429 I 0.000
PMAA_076490 Talaromyces marneffei PMAA_076490 I 0.000
TSTA_096850 Talaromyces stipitatus TSTA_096850 I 0.000
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.000
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I 0.000
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I 0.000
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.000
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.000
TEQG_06412 Trichophyton equinum TEQG_06412 I 0.000
H101_06850 Trichophyton interdigitale H101_06850 I 0.000
H102_08770 Trichophyton rubrum H102_08770 I 0.000
H105_08795 Trichophyton soudanense H105_08795 I 0.000
TESG_00798 Trichophyton tonsurans TESG_00798 I 0.000
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.000
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.000
UREG_04594 Uncinocarpus reesii UREG_04594 I 0.000
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.000
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.000
PV09_05311 Verruconis gallopava PV09_05311 I 0.000
J056_000182 Wallemia ichthyophaga J056_000182 I 0.000
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.000
YALI0_E20449g Yarrowia lipolytica YALI0_E20449g I 0.000
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.000
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.000
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.000