CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g019710
(
Sorghum bicolor
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Sb08g019710
T344356_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g019710.1
TCP
178
247
DAGARAIAAVGRSEPRNTSTSTMDAPSSSTSTSTKSSRSASEQHQHQQQNRHQHHQQQMVAHHPFYYAAA
Sb08g019710.1
TCP
274
377
LAQCAARGRTGTRELGHKTDGETIEWLLQQAELAIVAATGTSTIPANFSSLAVSLRSASRTAAQHKDAAMLGAWNHHHQQQPQQTPQDPGAGEFMRKCYREDAD
Links
Other
TCP
family TFs
Other
Sorghum bicolor
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb05g004800
Sorghum bicolor
Sb05g004800
N
0.914
Carubv10017043m.g
Capsella rubella
Carubv10017043m.g
N
0.900
VIT_12s0035g00690
Vitis vinifera
VIT_12s0035g00690
N
0.896
Pavir.Ea03897
Panicum virgatum
Pavir.Ea03897
N
0.886
Pm003922
Prunus mume
Pm003922
N
0.882
Cagra.1659s0005
Capsella grandiflora
Cagra.1659s0005
N
0.879
Bostr.7200s0121
Boechera stricta
Bostr.7200s0121
N
0.839
OBART01G42290
Oryza barthii
OBART01G42290
N
0.832