MDP0000199422 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000199422 T344920_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC

GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.936 0.778
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD

HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.932 0.746
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN

NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.932 0.746
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC

GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.932 0.762
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC

GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.932 0.762
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.899 0.746
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.895 0.746
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.892 0.619
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN

NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.849 0.571
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC

GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.849 0.571
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000199422 TCP 171 233

Links

Other TCP family TFs
Other Malus domestica TFs

299 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O3_06840 Capronia epimyces A1O3_06840 N 0.000
A1O5_09572 Cladophialophora psammophila A1O5_09572 N 0.000
A1O7_07289 Cladophialophora yegresii A1O7_07289 N 0.000
A1O9_02464 Exophiala aquamarina A1O9_02464 N 0.000
ACLA_065740 Aspergillus clavatus CADACLAG00006139 N 0.000
CADANGAG00009534 Aspergillus niger CADANGAG00009534 N 0.000
estExt_fgenesh1_pg.C_sca_17_chr8_1_00069 Nectria haematococca estExt_fgenesh1_pg.C_sca_17_chr8_1_00069 N 0.000
fgenesh1_pg.00868_#_68 Aspergillus carbonarius fgenesh1_pg.00868_#_68 N 0.000
HMPREF1120_09145 Exophiala dermatitidis HMPREF1120_09145 N 0.000
HMPREF1541_00390 Cyphellophora europaea HMPREF1541_00390 N 0.000
NechaG101164 Fusarium solani NechaG101164 N 0.000
PV05_04333 Exophiala xenobiotica PV05_04333 N 0.000
PV05_08746 Exophiala xenobiotica PV05_08746 N 0.000
PV06_01296 Exophiala oligosperma PV06_01296 N 0.000
PV07_11558 Cladophialophora immunda PV07_11558 N 0.000
PV10_00794 Exophiala mesophila PV10_00794 N 0.000
W97_09274 Coniosporium apollinis W97_09274 N 0.000
Z518_06537 Rhinocladiella mackenziei Z518_06537 N 0.000
Z519_01024 Cladophialophora bantiana Z519_01024 N 0.000