Bo2g158480 (Brassica oleracea)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 Bo2g158480 T345209_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.773
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.707
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.707
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.707
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.707
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.693
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.653
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.640
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.640
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.640
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.640
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.640
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.640
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.640
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.627
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.627
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.613
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.613
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.613
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.613
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.600
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.600
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.573
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.573
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.573
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.560
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.547
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.480
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g158480.1 TCR/CxC 114 150
Bo2g158480.1 TCR/CxC 193 230

Links

Other TCR/CxC family TFs
Other Brassica oleracea TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O5_03439 Cladophialophora psammophila A1O5_03439 I 0.000
ACRE_034890 Acremonium chrysogenum ACRE_034890 I 0.000
AOL_s00083g463 Arthrobotrys oligospora AOL_s00083g463 I 0.000
ARB_05394 Arthroderma benhamiae ARB_05394 N 0.000
BBA_01304 Beauveria bassiana BBA_01304 I 0.000
Bcin02g07540 Botrytis cinerea Bcin02g07540 I 0.000
CCM_01294 Cordyceps militaris CCM_01294 I 0.000
CFIO01_07503 Colletotrichum fioriniae CFIO01_07503 I 0.000
CGGC5_13371 Colletotrichum gloeosporioides CGGC5_13371 I 0.000
CH063_01293 Colletotrichum higginsianum CH063_01293 I 0.000
CIMG_03820 Coccidioides immitis CIMG_03820 N 0.000
CMQ_5441 Grosmannia clavigera CMQ_5441 I 0.000
Cob_06009 Colletotrichum orbiculare Cob_06009 I 0.000
CPC735_005020 Coccidioides posadasii CPC735_005020 N 0.000
CPUR_04347 Claviceps purpurea CPUR_04347 I 0.000
CSUB01_04252 Colletotrichum sublineola CSUB01_04252 I 0.000
CTHT_0018750 Chaetomium thermophilum CTHT_0018750 I 0.000
estExt_fgenesh2_pg.C_80281 Neurospora discreta estExt_fgenesh2_pg.C_80281 I 0.000
EV44_g6127 Erysiphe necator EV44_g6127 I 0.000
e_gw1.3.1240.1 Nectria haematococca e_gw1.3.1240.1 I 0.000
F503_03781 Ophiostoma piceae uamh F503_03781 I 0.000
FFUJ_13548 Fusarium fujikuroi FFUJ_13548 I 0.000
FGRRES_06311 Fusarium graminearum FGRRES_06311 I 0.000
FOXG_08063 Fusarium oxysporum FOXG_08063 I 0.000
FPSE_01182 Fusarium pseudograminearum FPSE_01182 I 0.000
FVEG_04985 Fusarium verticillioides FVEG_04985 I 0.000
GGTG_05592 Gaeumannomyces graminis GGTG_05592 I 0.000
GLRG_01973 Colletotrichum graminicola GLRG_01973 I 0.000
GMDG_06980 Pseudogymnoascus destructans GMDG_06980 I 0.000
GSTUM_00007462001 Tuber melanosporum GSTUM_00007462001 I 0.000
H072_10673 Dactylellina haptotyla H072_10673 I 0.000
H101_04757 Trichophyton interdigitale H101_04757 N 0.000
H102_07608 Trichophyton rubrum H102_07608 N 0.000
H105_07634 Trichophyton soudanense H105_07634 N 0.000
HMPREF1624_02827 Sporothrix schenckii HMPREF1624_02827 I 0.000
MAC_04654 Metarhizium acridum MAC_04654 I 0.000
MAJ_07370 Metarhizium majus MAJ_07370 I 0.000
MAM_00034 Metarhizium album MAM_00034 I 0.000
MANI_117684 Metarhizium anisopliae MANI_117684 I 0.000
MAPG_04524 Magnaporthe poae MAPG_04524 I 0.000
MBM_04034 Marssonina brunnea MBM_04034 I 0.000
MBR_02972 Metarhizium brunneum MBR_02972 I 0.000
MCYG_00678 Arthroderma otae MCYG_00678 N 0.000
MCYG_00678 Microsporum canis MCYG_00678 N 0.000
MGU_00040 Metarhizium guizhouense MGU_00040 I 0.000
MGYG_01294 Microsporum gypseum MGYG_01294 N 0.000
MYCTH_2308260 Myceliophthora thermophila MYCTH_2308260 I 0.000
NCU06907 Neurospora crassa NCU06907 D 0.000
NechaG38204 Fusarium solani NechaG38204 I 0.000
NEUTE1DRAFT_130988 Neurospora tetrasperma NEUTE1DRAFT_130988 I 0.000
OCS_03275 Ophiocordyceps sinensis OCS_03275 I 0.000
OIDMADRAFT_103771 Oidiodendron maius OIDMADRAFT_103771 I 0.000
PFICI_12570 Pestalotiopsis fici PFICI_12570 I 0.000
PODANS_5_11890 Podospora anserina PODANS_5_11890 I 0.000
S40285_02311 Stachybotrys chlorohalonata S40285_02311 I 0.000
S40288_02152 Stachybotrys chartarum S40288_02152 I 0.000
SAPIO_CDS4389 Scedosporium apiospermum SAPIO_CDS4389 I 0.000
SBOR_8019 Sclerotinia borealis SBOR_8019 I 0.000
SMAC_05878 Sordaria macrospora SMAC_05878 I 0.000
SPBR_02307 Sporothrix brasiliensis SPBR_02307 I 0.000
TEQG_05544 Trichophyton equinum TEQG_05544 N 0.000
TESG_05703 Trichophyton tonsurans TESG_05703 N 0.000
THITE_2117700 Thielavia terrestris THITE_2117700 I 0.000
TRIATDRAFT_150201 Trichoderma atroviride TRIATDRAFT_150201 I 0.000
TRIREDRAFT_121584 Trichoderma reesei TRIREDRAFT_121584 I 0.000
TRIVIDRAFT_82456 Trichoderma virens TRIVIDRAFT_82456 I 0.000
TRV_03376 Trichophyton verrucosum TRV_03376 N 0.000
UCREL1_8337 Eutypa lata UCREL1_8337 I 0.000
UCRPA7_7147 Togninia minima UCRPA7_7147 I 0.000
UV8b_4535 Ustilaginoidea virens UV8b_4535 I 0.000
V499_09093 Pseudogymnoascus pannorum V499_09093 I 0.000
VDBG_03095 Verticillium alfalfae VDBG_03095 I 0.000
VDBG_03095 Verticillium albo atrum VDBG_03095 I 0.000
VHEMI07645 Torrubiella hemipterigena VHEMI07645 I 0.000
X797_001037 Metarhizium robertsii X797_001037 I 0.000
Z519_10261 Cladophialophora bantiana Z519_10261 I 0.000