CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0D01580
(
Kazachstania naganishii
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04001 (Vhr1)
IPR007147
KNAG_0D01580
T350423_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK69910
VHR1
6
96
SSHGITAKIRKEINFMDELKWREFSSRRLELINKFQLSEYKASEQDQNIKHIANVLRTEFRFPLSAQSQFEKLVTAAVQSVRRNRRRSSRR
Links
Other
VHR1
family TFs
Other
Kazachstania naganishii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
11035_YIL056W
Saccharomyces paradoxus
11035_YIL056W
I
0.714
11559_YIL056W
Saccharomyces bayanus
11559_YIL056W
I
0.714
10921_YIL056W
Saccharomyces mikatae
10921_YIL056W
I
0.714
VHR1
Saccharomyces cerevisiae
YIL056W
D
0.714
SU7_1620
Saccharomyces arboricola
SU7_1620
I
0.714
KAFR_0I01770
Kazachstania africana
KAFR_0I01770
I
0.714