CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0L01530
(
Kazachstania naganishii
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04001 (Vhr1)
IPR007147
KNAG_0L01530
T350424_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR2
M00917_2.00
Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN
PBM
Gordan et al.(2011)
Vhr2
0.780
0.780
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
0.758
0.758
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK72773
VHR1
1
91
MGKGTTHRIRELLKFTNEKKWKQFSSRRLELIDRFGLSERKASEQDDNIRQIATLLREEFEFPESSALEFEKLVTAAVQSVRRNRKRSKKK
Links
Other
VHR1
family TFs
Other
Kazachstania naganishii
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy