CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kpol_1066p52
(
Vanderwaltozyma polyspora
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04001 (Vhr1)
IPR007147
Kpol_1066p52
T350425_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
0.846
0.846
VHR2
M00917_2.00
Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN
PBM
Gordan et al.(2011)
Vhr2
0.802
0.802
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO16484
VHR1
23
113
SGNGTTHKIREQLNFKDDKKWKQFSSRRLELIDRFGLSNKKASEQDYNIKQIATILRTEFNYPVSSASEFEKLVTAAVQSVRRNRKRSKKK
Links
Other
VHR1
family TFs
Other
Vanderwaltozyma polyspora
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy