CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Db02235
(
Panicum virgatum
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Pavir.Db02235
T350646_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db02235.1.p
Whirly
165
300
IYKGKAALAFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKVEPTPDGNGRFFNLSVQNRLVNVDESIYIPITKGEFAVIVST
Pavir.Db02235.2.p
Whirly
93
228
IYKGKAALAFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKVEPTPDGNGRFFNLSVQNRLVNVDESIYIPITKGEFAVIVST
Pavir.Db02235.3.p
Whirly
146
281
IYKGKAALAFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKVEPTPDGNGRFFNLSVQNRLVNVDESIYIPITKGEFAVIVST
Pavir.Db02235.4.p
Whirly
93
228
IYKGKAALAFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKVEPTPDGNGRFFNLSVQNRLVNVDESIYIPITKGEFAVIVST
Pavir.Db02235.5.p
Whirly
93
228
IYKGKAALAFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKVEPTPDGNGRFFNLSVQNRLVNVDESIYIPITKGEFAVIVST
Links
Other
Whirly
family TFs
Other
Panicum virgatum
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy