AMTR_s00069p00196720 (Amborella trichopoda)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 AMTR_s00069p00196720 T350681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN19486 WRC 123 164

Links

Other WRC family TFs
Other Amborella trichopoda TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27496.m000094 Ricinus communis 27496.m000094 N 0.721
28976.m000158 Ricinus communis 28976.m000158 N 0.762
29700.m000761 Ricinus communis 29700.m000761 I 0.714
30073.m002312 Ricinus communis 30073.m002312 I 0.714
AtGRF2 Arabidopsis lyrata Al_scaffold_0007_269 N 0.744
AMTR_s00018p00250840 Amborella trichopoda AMTR_s00018p00250840 N 0.744
AMTR_s00040p00189460 Amborella trichopoda AMTR_s00040p00189460 I 0.714
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.738
AMTR_s00065p00092420 Amborella trichopoda AMTR_s00065p00092420 N 0.714
Aquca_006_00049 Aquilegia coerulea Aquca_006_00049 N 0.714
Aquca_013_00537 Aquilegia coerulea Aquca_013_00537 I 0.738
Aquca_037_00140 Aquilegia coerulea Aquca_037_00140 N 0.714
Aquca_052_00053 Aquilegia coerulea Aquca_052_00053 I 0.714
Aquca_076_00011 Aquilegia coerulea Aquca_076_00011 N 0.721
Aquca_122_00004 Aquilegia coerulea Aquca_122_00004 N 0.762
GRF1 Arabidopsis thaliana AT2G22840 N 0.744
GRF3 Arabidopsis thaliana AT2G36400 N 0.721
GRF4 Arabidopsis thaliana AT3G52910 N 0.786
GRF2 Arabidopsis thaliana AT4G37740 N 0.744
BGIOSGA008811 Oryza indica BGIOSGA008811 N 0.762
BGIOSGA016961 Oryza indica BGIOSGA016961 N 0.767
Bo1g003460 Brassica oleracea Bo1g003460 N 0.714
Bo3g042310 Brassica oleracea Bo3g042310 N 0.744
Bo4g122960 Brassica oleracea Bo4g122960 N 0.738
Bo4g186220 Brassica oleracea Bo4g186220 N 0.721
Bo6g066990 Brassica oleracea Bo6g066990 N 0.767
Bo7g118730 Brassica oleracea Bo7g118730 N 0.744
Bo8g082350 Brassica oleracea Bo8g082350 N 0.767
Bo8g090420 Brassica oleracea Bo8g090420 N 0.767
Bostr.13129s0083 Boechera stricta Bostr.13129s0083 N 0.786
Bostr.19427s0054 Boechera stricta Bostr.19427s0054 N 0.744
Bostr.23794s0452 Boechera stricta Bostr.23794s0452 N 0.721
Bostr.7867s1635 Boechera stricta Bostr.7867s1635 N 0.744
Bra000575 Brassica rapa Bra000575 N 0.744
Bra005268 Brassica rapa Bra005268 N 0.762
Bra006956 Brassica rapa Bra006956 N 0.762
Bra011781 Brassica rapa Bra011781 N 0.721
Bra017851 Brassica rapa Bra017851 N 0.744
Bra019640 Brassica rapa Bra019640 N 0.762
Bra023066 Brassica rapa Bra023066 N 0.738
Bra028541 Brassica rapa Bra028541 N 0.744
BRADI3G51685 Brachypodium distachyon BRADI3G51685 N 0.762
Cagra.0228s0030 Capsella grandiflora Cagra.0228s0030 N 0.721
Cagra.0612s0011 Capsella grandiflora Cagra.0612s0011 N 0.786
Cagra.4290s0006 Capsella grandiflora Cagra.4290s0006 N 0.744
Cagra.9757s0010 Capsella grandiflora Cagra.9757s0010 N 0.744
Carubv10004544m.g Capsella rubella Carubv10004544m.g N 0.744
Carubv10017366m.g Capsella rubella Carubv10017366m.g N 0.786
Carubv10022975m.g Capsella rubella Carubv10022975m.g N 0.744
Carubv10025172m.g Capsella rubella Carubv10025172m.g N 0.721
cassava14256.m1 Manihot esculenta cassava14256.m1 I 0.714
cassava22415.valid.m1 Manihot esculenta cassava22415.valid.m1 N 0.714
cassava32870.m1 Manihot esculenta cassava32870.m1 N 0.721
cassava35131.m1 Manihot esculenta cassava35131.m1 N 0.714
cassava37892.valid.m1 Manihot esculenta cassava37892.valid.m1 N 0.721
cassava38580.m1 Manihot esculenta cassava38580.m1 N 0.714
cassava41970.valid.m1 Manihot esculenta cassava41970.valid.m1 I 0.714
cassava7966.valid.m1 Manihot esculenta cassava7966.valid.m1 N 0.714
Ca_00772 Cicer arietinum Ca_00772 N 0.721
Ca_04035 Cicer arietinum Ca_04035 N 0.721
Ca_09216 Cicer arietinum Ca_09216 N 0.714
Ca_10603 Cicer arietinum Ca_10603 N 0.714
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N 0.762
Ciclev10019529m.g Citrus clementina Ciclev10019529m.g N 0.721
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.714
Ciclev10025209m.g Citrus clementina Ciclev10025209m.g N 0.738
Ciclev10032065m.g Citrus clementina Ciclev10032065m.g I 0.714
Cla006913 Citrullus lanatus Cla006913 I 0.714
Cla014264 Citrullus lanatus Cla014264 N 0.738
Cla017990 Citrullus lanatus Cla017990 N 0.721
Cla022992 Citrullus lanatus Cla022992 N 0.714
Cucsa.017410 Cucumis sativus Cucsa.017410 I 0.714
Cucsa.103390 Cucumis sativus Cucsa.103390 N 0.738
Cucsa.378420 Cucumis sativus Cucsa.378420 N 0.721
Cucsa.395430 Cucumis sativus Cucsa.395430 N 0.714
Eucgr.A01418 Eucalyptus grandis Eucgr.A01418 N 0.714
Eucgr.A01534 Eucalyptus grandis Eucgr.A01534 N 0.744
Eucgr.F00097 Eucalyptus grandis Eucgr.F00097 N 0.714
evm.TU.supercontig_129.72 Carica papaya evm.TU.supercontig_129.72 N 0.738
evm.TU.supercontig_3.145 Carica papaya evm.TU.supercontig_3.145 N 0.744
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N 0.721
AtGRF4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001379 N 0.786
AtGRF3 Arabidopsis lyrata fgenesh2_kg.4__1676__AT2G36400.1 N 0.721
AtGRF1 Arabidopsis lyrata fgenesh2_kg.4__207__AT2G22840.1 N 0.744
gene02620-v1.0-hybrid Fragaria vesca gene02620-v1.0-hybrid N 0.738
gene05636-v1.0-hybrid Fragaria vesca gene05636-v1.0-hybrid N 0.738
gene12549-v1.0-hybrid Fragaria vesca gene12549-v1.0-hybrid I 0.714
gene12741-v1.0-hybrid Fragaria vesca gene12741-v1.0-hybrid N 0.738
GLYMA01G35145 Glycine max GLYMA01G35145 N 0.714
GLYMA03G35010 Glycine max GLYMA03G35010 N 0.721
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.762
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.762
GLYMA09G34565 Glycine max GLYMA09G34565 N 0.714
GLYMA10G07790 Glycine max GLYMA10G07790 N 0.714
GLYMA13G21625 Glycine max GLYMA13G21625 N 0.714
GLYMA14G10090 Glycine max GLYMA14G10090 N 0.714
GLYMA14G10100 Glycine max GLYMA14G10100 N 0.714
GLYMA17G35090 Glycine max GLYMA17G35090 N 0.714
GLYMA17G35100 Glycine max GLYMA17G35100 N 0.714
GLYMA19G37740 Glycine max GLYMA19G37740 N 0.721
Gorai.003G032300 Gossypium raimondii Gorai.003G032300 N 0.738
Gorai.003G057700 Gossypium raimondii Gorai.003G057700 I 0.714
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.738
Gorai.005G098700 Gossypium raimondii Gorai.005G098700 N 0.714
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I 0.721
Gorai.008G265600 Gossypium raimondii Gorai.008G265600 N 0.714
Gorai.009G222200 Gossypium raimondii Gorai.009G222200 N 0.714
Gorai.009G406500 Gossypium raimondii Gorai.009G406500 N 0.721
Gorai.010G027700 Gossypium raimondii Gorai.010G027700 N 0.714
Gorai.013G184200 Gossypium raimondii Gorai.013G184200 I 0.714
GRMZM2G045977 Zea mays GRMZM2G045977 N 0.767
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.900
GRMZM2G124566 Zea mays GRMZM2G124566 N 0.767
GRMZM5G893117 Zea mays GRMZM5G893117 I 1.000
GSMUA_Achr10G06370_001 Musa acuminata GSMUA_Achr10G06370_001 I 0.714
GSMUA_Achr11G21590_001 Musa acuminata GSMUA_Achr11G21590_001 I 0.767
GSMUA_Achr2G04650_001 Musa acuminata GSMUA_Achr2G04650_001 I 0.714
GSMUA_Achr3G22790_001 Musa acuminata GSMUA_Achr3G22790_001 N 0.714
GSMUA_Achr5G20170_001 Musa acuminata GSMUA_Achr5G20170_001 I 0.767
GSMUA_Achr8G07650_001 Musa acuminata GSMUA_Achr8G07650_001 N 0.714
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.762
GSMUA_Achr8G26530_001 Musa acuminata GSMUA_Achr8G26530_001 N 0.738
GSMUA_AchrUn_randomG15490_001 Musa acuminata GSMUA_AchrUn_randomG15490_001 N 0.714
gw1.246.118.1 Physcomitrella patens gw1.246.118.1 N 0.762
gw1.344.18.1 Physcomitrella patens gw1.344.18.1 N 0.762
LjSGA_011435.1 Lotus japonicus LjSGA_011435.1 N 0.714
LPERR02G22680 Leersia perrieri LPERR02G22680 N 0.762
Lus10009533.g Linum usitatissimum Lus10009533.g I 0.714
Lus10011559.g Linum usitatissimum Lus10011559.g N 0.738
Lus10014380.g Linum usitatissimum Lus10014380.g N 0.721
Lus10019275.g Linum usitatissimum Lus10019275.g N 0.738
Lus10020352.g Linum usitatissimum Lus10020352.g I 0.714
MDP0000125282 Malus domestica MDP0000125282 N 0.738
MDP0000214734 Malus domestica MDP0000214734 N 0.714
MDP0000215583 Malus domestica MDP0000215583 N 0.738
MDP0000814056 Malus domestica MDP0000814056 N 0.738
mgf001554m Mimulus guttatus mgf001554m N 0.744
mgf002023m Mimulus guttatus mgf002023m I 0.714
mgf011630m Mimulus guttatus mgf011630m N 0.744
mgf013307m Mimulus guttatus mgf013307m N 0.714
MLOC_80060 Hordeum vulgare MLOC_80060 N 0.762
MTR_1g017490 Medicago truncatula MTR_1g017490 N 0.714
OB04G29390 Oryza brachyantha OB04G29390 N 0.767
OBART02G27850 Oryza barthii OBART02G27850 N 0.762
OBART04G22410 Oryza barthii OBART04G22410 N 0.767
OGLUM02G28430 Oryza glumaepatula OGLUM02G28430 N 0.762
OGLUM04G22390 Oryza glumaepatula OGLUM04G22390 N 0.767
OLONG_025493 Oryza longistaminata OLONG_025493 N 0.767
OMERI02G27040 Oryza meridionalis OMERI02G27040 N 0.762
ONIVA02G30970 Oryza nivara ONIVA02G30970 N 0.762
ONIVA04G21020 Oryza nivara ONIVA04G21020 N 0.767
OPUNC02G25570 Oryza punctata OPUNC02G25570 N 0.762
OPUNC04G20120 Oryza punctata OPUNC04G20120 N 0.767
orange1.1g007514m.g Citrus sinensis orange1.1g007514m.g N 0.738
orange1.1g009918m.g Citrus sinensis orange1.1g009918m.g N 0.721
orange1.1g020051m.g Citrus sinensis orange1.1g020051m.g I 0.714
ORGLA02G0239200 Oryza glaberrima ORGLA02G0239200 N 0.762
ORGLA04G0194300 Oryza glaberrima ORGLA04G0194300 N 0.767
ORUFI02G29340 Oryza rufipogon ORUFI02G29340 N 0.762
ORUFI04G24060 Oryza rufipogon ORUFI04G24060 N 0.767
GRF10 Oryza sativa OS02G0678800 N 0.762
GRF12 Oryza sativa OS04G0574500 N 0.767
Pavir.J06517 Panicum virgatum Pavir.J06517 N 0.767
PGSC0003DMG400004942 Solanum tuberosum PGSC0003DMG400004942 N 0.714
PGSC0003DMG400018491 Solanum tuberosum PGSC0003DMG400018491 I 0.714
PGSC0003DMG400021403 Solanum tuberosum PGSC0003DMG400021403 N 0.738
PGSC0003DMG400028259 Solanum tuberosum PGSC0003DMG400028259 N 0.762
PGSC0003DMG400030881 Solanum tuberosum PGSC0003DMG400030881 I 0.714
PK05727.1 Cannabis sativa PK05727.1 N 0.738
PK16254.1 Cannabis sativa PK16254.1 N 0.738
PK18842.1 Cannabis sativa PK18842.1 N 0.714
Pm002351 Prunus mume Pm002351 N 0.738
Pm019573 Prunus mume Pm019573 I 0.714
Pm019687 Prunus mume Pm019687 N 0.738
POPTR_0001s08310 Populus trichocarpa POPTR_0001s08310 N 0.738
POPTR_0001s16920 Populus trichocarpa POPTR_0001s16920 I 0.714
POPTR_0002s11590 Populus trichocarpa POPTR_0002s11590 N 0.714
POPTR_0003s11800 Populus trichocarpa POPTR_0003s11800 N 0.714
POPTR_0006s11630 Populus trichocarpa POPTR_0006s11630 N 0.762
POPTR_0007s14720 Populus trichocarpa POPTR_0007s14720 N 0.714
POPTR_0012s02950 Populus trichocarpa POPTR_0012s02950 N 0.738
POPTR_0013s07500 Populus trichocarpa POPTR_0013s07500 I 0.714
POPTR_0014s00780 Populus trichocarpa POPTR_0014s00780 N 0.738
POPTR_0014s01320 Populus trichocarpa POPTR_0014s01320 N 0.714
POPTR_0015s00860 Populus trichocarpa POPTR_0015s00860 N 0.721
PRUPE_ppa003017mg Prunus persica PRUPE_ppa003017mg N 0.738
PRUPE_ppa022199mg Prunus persica PRUPE_ppa022199mg I 0.714
PRUPE_ppa024293mg Prunus persica PRUPE_ppa024293mg N 0.738
SapurV1A.0045s0430 Salix purpurea SapurV1A.0045s0430 N 0.714
SapurV1A.0208s0190 Salix purpurea SapurV1A.0208s0190 N 0.714
SapurV1A.0235s0230 Salix purpurea SapurV1A.0235s0230 N 0.738
SapurV1A.0326s0130 Salix purpurea SapurV1A.0326s0130 I 0.714
SapurV1A.0568s0060 Salix purpurea SapurV1A.0568s0060 I 0.714
SapurV1A.0608s0150 Salix purpurea SapurV1A.0608s0150 N 0.714
SapurV1A.0755s0030 Salix purpurea SapurV1A.0755s0030 N 0.738
Sb04g031890 Sorghum bicolor Sb04g031890 N 0.767
SELMODRAFT_442384 Selaginella moellendorffii SELMODRAFT_442384 I 0.786
SELMODRAFT_442763 Selaginella moellendorffii SELMODRAFT_442763 I 0.786
Si018252m.g Setaria italica Si018252m.g N 0.767
Solyc02g092070.2 Solanum lycopersicum Solyc02g092070.2 N 0.738
Solyc04g077510.2 Solanum lycopersicum Solyc04g077510.2 N 0.714
Solyc08g005430.2 Solanum lycopersicum Solyc08g005430.2 I 0.714
Solyc08g075950.1 Solanum lycopersicum Solyc08g075950.1 I 0.714
Solyc09g009200.1 Solanum lycopersicum Solyc09g009200.1 N 0.762
Solyc10g083510.1 Solanum lycopersicum Solyc10g083510.1 N 0.762
TCM_000838 Theobroma cacao TCM_000838 N 0.738
TCM_015497 Theobroma cacao TCM_015497 N 0.738
TCM_016120 Theobroma cacao TCM_016120 I 0.721
TCM_022490 Theobroma cacao TCM_022490 N 0.721
TCM_025561 Theobroma cacao TCM_025561 I 0.714
TCM_034655 Theobroma cacao TCM_034655 N 0.714
Thhalv10000124m.g Eutrema salsugineum Thhalv10000124m.g N 0.744
Thhalv10010453m.g Eutrema salsugineum Thhalv10010453m.g N 0.767
Thhalv10013862m.g Eutrema salsugineum Thhalv10013862m.g N 0.714
Thhalv10016778m.g Eutrema salsugineum Thhalv10016778m.g N 0.721
Thhalv10024915m.g Eutrema salsugineum Thhalv10024915m.g N 0.744
Traes_2AL_2FE59A2DC Triticum aestivum Traes_2AL_2FE59A2DC N 0.744
Traes_2BL_DE9A7327E Triticum aestivum Traes_2BL_DE9A7327E N 0.714
VIT_00s0494g00010 Vitis vinifera VIT_00s0494g00010 N 0.738
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.738
VIT_16s0039g01450 Vitis vinifera VIT_16s0039g01450 I 0.714
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.714
VIT_18s0001g08650 Vitis vinifera VIT_18s0001g08650 N 0.714