CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g195580
(
Brassica oleracea
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Bo4g195580
T350733_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
0.872
0.872
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN
NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
0.872
0.872
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g195580.1
WRC
99
141
PEPTRCRRTDGKKWRCSNKVLLFQKYCERHMHRGRKRSRKLVE
Bo4g195580.1
WRC
319
361
NEPGRCRRTDGKKWRCSKDVLSGQKYCDRHMHRGSIKKKHPVE
Links
Other
WRC
family TFs
Other
Brassica oleracea
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy