Bo4g195580 (Brassica oleracea)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 Bo4g195580 T350733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH

DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
0.872 0.872
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN

NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
0.872 0.872
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g195580.1 WRC 99 141
Bo4g195580.1 WRC 319 361

Links

Other WRC family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AtGRF9 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002259 I 0.859
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.744
Bostr.25993s0227 Boechera stricta Bostr.25993s0227 I 0.860
Bra039334 Brassica rapa Bra039334 I 0.988
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.884
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.884
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.706
Ca_19588 Cicer arietinum Ca_19588 I 0.733
Cla021612 Citrullus lanatus Cla021612 N 0.744
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.733
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.709
GRF9 Arabidopsis thaliana AT2G45480 D 0.882
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.709
PK07653.1 Cannabis sativa PK07653.1 I 0.744
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.721
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.709
TCM_005483 Theobroma cacao TCM_005483 I 0.721
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.894