BRADI2G05500 (Brachypodium distachyon)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 BRADI2G05500 T352389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG

CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.860 0.831
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH

DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.860 0.831
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG

CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.859 0.831
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH

DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.859 0.831
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN

NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.856 0.814
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD

HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.856 0.814
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN

NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.854 0.814
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK

MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.854 0.814
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN

NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.854 0.814
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN

NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.824 0.610
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR

YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.824 0.610
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH

DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.824 0.610
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN

NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.824 0.610
WRKY60
M02551_2.00
Arabidopsis thaliana
NYGGTCAAMNN

NNKTTGACCRN
PBM
Weirauch et al.(2014)
pTH7379
0.818 0.627
WRKY18
M02560_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7360
0.814 0.644
WRKY18
M00900_2.00
Arabidopsis thaliana
NVGTCNN

NNGACBN
PBM
Franco-Zorrilla et al.(2014)
WRKY18
0.814 0.644
WRKY18
M07416_2.00
Arabidopsis thaliana
NNHRGTCAASR

YSTTGACYDNN
Dap-seq
OMalley et al.(2016)
WRKY18_col_a
0.814 0.644
WRKY18
M07417_2.00
Arabidopsis thaliana
NNNHWAGTCAANR

YNTTGACTWDNNN
Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a
0.814 0.644
WRKY18
M11465_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY18_Q2
0.814 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G05500.1 WRKY 262 320

Links

Other WRKY family TFs
Other Brachypodium distachyon TFs

775 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I 0.000
Alligator_sinensis_CCG014169.1 Alligator sinensis Alligator_sinensis_CCG014169.1 N 0.000
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I 0.000
ENSAPLG00000006398 Anas platyrhynchos ENSAPLG00000006398 I 0.000
Afo_R009018 Aptenodytes forsteri Afo_R009018 I 0.000
ENSAMXG00000001195 Astyanax mexicanus ENSAMXG00000001195 I 0.000
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I 0.000
TBX5 Bos taurus ENSBTAG00000011384 I 0.000
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I 0.000
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D 0.000
Brh_R011905 Buceros rhinoceros Brh_R011905 I 0.000
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.000
Aan_R008261 Calypte anna Aan_R008261 I 0.000
TBX5 Canis familiaris ENSCAFG00000009189 I 0.000
TBX5 Cavia porcellus ENSCPOG00000014558 I 0.000
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I 0.000
Cmyd_10005826 Chelonia mydas Cmyd_10005826 I 0.000
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I 0.000
tbx5a Danio rerio ENSDARG00000024894 I 0.000
tbx16 Danio rerio ENSDARG00000007329 I 0.000
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I 0.000
TBX5 Equus caballus ENSECAG00000017114 I 0.000
TBX5 Felis catus ENSFCAG00000005574 I 0.000
ENSFALG00000007252 Ficedula albicollis ENSFALG00000007252 I 0.000
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I 0.000
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I 0.000
TBX5 Gallus gallus ENSGALG00000008253 I 0.000
TBX6 Gallus gallus ENSGALG00000006374 I 0.000
tbx16 Gasterosteus aculeatus ENSGACG00000012454 I 0.000
tbx5a Gasterosteus aculeatus ENSGACG00000016787 I 0.000
Gfo_R008747 Geospiza fortis Gfo_R008747 I 0.000
TBX5 Gorilla gorilla ENSGGOG00000013775 I 0.000
TBX5 Homo sapiens ENSG00000089225 D 0.000
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I 0.000
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I 0.000
ENSLACG00000012884 Latimeria chalumnae ENSLACG00000012884 I 0.000
ENSLOCG00000006550 Lepisosteus oculatus ENSLOCG00000006550 I 0.000
TBX5 Loxodonta africana ENSLAFG00000010125 I 0.000
ENSP00000384152 Macaca fascicularis ENSP00000384152 I 0.000
TBX5 Macaca mulatta ENSMMUG00000016202 I 0.000
TBX6 Meleagris gallopavo ENSMGAG00000007663 I 0.000
TBX5 Meleagris gallopavo ENSMGAG00000010075 I 0.000
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.000
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I 0.000
Tbx5 Mus musculus ENSMUSG00000018263 D 0.000
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I 0.000
TBX5 Myotis lucifugus ENSMLUG00000016530 I 0.000
Ogr05323 Ophisaurus gracilis Ogr05323 I 0.000
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I 0.000
ENSONIG00000003732 Oreochromis niloticus ENSONIG00000003732 I 0.000
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I 0.000
tbx16 Oryzias latipes ENSORLG00000014344 I 0.000
tbx5 Oryzias latipes ENSORLG00000008185 I 0.000
tbx5a Oryzias latipes ENSORLG00000007339 I 0.000
TBX5 Otolemur garnettii ENSOGAG00000016204 I 0.000
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I 0.000
TBX5 Pan troglodytes ENSPTRG00000005496 I 0.000
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I 0.000
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I 0.000
ENSPFOG00000017869 Poecilia formosa ENSPFOG00000017869 I 0.000
ENSPFOG00000016001 Poecilia formosa ENSPFOG00000016001 I 0.000
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I 0.000
Tbx5 Rattus norvegicus ENSRNOG00000001399 I 0.000
TBX5 Sus scrofa ENSSSCG00000009867 I 0.000
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.000
TBX6 Taeniopygia guttata ENSTGUG00000010188 I 0.000
tbx5a Takifugu rubripes ENSTRUG00000015054 I 0.000
tbx16 Takifugu rubripes ENSTRUG00000016468 I 0.000
tbx5a Tetraodon nigroviridis ENSTNIG00000009036 I 0.000
tbx16 Tetraodon nigroviridis ENSTNIG00000011487 N 0.000
TBX5 Tursiops truncatus ENSTTRG00000000980 I 0.000
Tal_R011807 Tyto alba Tal_R011807 I 0.000
vegt.S Xenopus laevis XB-GENE-1033836 N 0.000
vegt.L Xenopus laevis XB-GENE-6252142 N 0.000
ABC75836 Xenopus laevis ABC75836 I 0.000
AAI69776 Xenopus laevis AAI69776 I 0.000
BAC20262 Xenopus laevis BAC20262 I 0.000
BAH04511 Xenopus tropicalis BAH04511 I 0.000
BAH04512 Xenopus tropicalis BAH04512 I 0.000
vegt Xenopus tropicalis XB-GENE-1033829 I 0.000
tbx6 Xenopus tropicalis XB-GENE-6257419 I 0.000
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I 0.000
ENSXMAG00000008530 Xiphophorus maculatus ENSXMAG00000008530 I 0.000