CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G05010_001
(
Musa acuminata
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
GSMUA_Achr1G05010_001
T352932_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH
DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.812
0.573
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.811
0.556
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.810
0.547
ZAP1
M11463_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.810
0.547
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P05010_001
WRKY
130
188
SDLWAWRKYGQKPIKGSPYPRSYYRCSTSKGCQARKQVEQSRADPGMLLITYTAEHNHP
GSMUA_Achr1P05010_001
WRKY
291
348
DDGYRWRKYGQKAVKNSVHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP
Links
Other
WRKY
family TFs
Other
Musa acuminata
TFs
432 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy