CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G37710
(
Oryza brachyantha
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
OB01G37710
T353349_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM
KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.844
0.741
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.841
0.741
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.841
0.741
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.831
0.707
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.829
0.672
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.829
0.672
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.826
0.690
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.825
0.655
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.824
0.655
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.824
0.655
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.824
0.638
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.824
0.638
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.824
0.638
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.821
0.672
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.818
0.603
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.817
0.655
WRKY59
M07382_2.00
Arabidopsis thaliana
NDWWAGTCAAMN
NKTTGACTWWHN
Dap-seq
OMalley et al.(2016)
WRKY59_col_a
0.812
0.621
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.811
0.534
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.811
0.534
WRKY11
M11464_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.811
0.534
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G37710.1
WRKY
37
94
DDGYKWRKYGKKTVKNSPNPRNYYRCSTEGCTVKKRVERDRNDPRYVVTMYEGRHSHV
Links
Other
WRKY
family TFs
Other
Oryza brachyantha
TFs
1038 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy