CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ORGLA06G0292200 *(Oryza glaberrima)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	ORGLA06G0292200	T354031_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.883	0.797
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.883	0.797
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.883	0.797
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.871	0.763
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.871	0.763
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.871	0.763
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.871	0.763
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.868	0.746
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.868	0.746
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.868	0.746
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.866	0.763
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.866	0.763
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.865	0.729
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.865	0.729
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.865	0.729
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.861	0.746
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.861	0.746
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.854	0.729
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.854	0.729
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.854	0.729
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.853	0.661
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.853	0.661
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.853	0.661
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.853	0.729
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.853	0.729
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.853	0.729
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.845	0.661
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.845	0.661
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.845	0.661
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.820	0.508
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.820	0.525
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.820	0.525
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.820	0.525
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.820	0.525
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.820	0.525
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.819	0.593
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.819	0.525
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.817	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.817	0.508
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.816	0.508
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.815	0.542
WRKY12 M00898_2.00	Arabidopsis thaliana	NHGGTCAACNN	NNGTTGACCDN	PBM Franco-Zorrilla et al.(2014) WRKY12	0.812	0.525
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.810	0.542
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ORGLA06G0292200.1	WRKY	309	367	SDNYSWRKYGQKPIKGSPHPRGYYRCSSKKDCPARKHVERCRSDPAMLLVTYENEHNHA

Links
Other WRKY family TFs
Other *Oryza glaberrima* TFs

1792 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
nAv.1.0.1.g01891	Acanthocheilonema viteae	nAv.1.0.1.g01891	I	0.000
ACYPI007601	Acyrthosiphon pisum	ACYPI007601	I	0.000
AAEL007190	Aedes aegypti	AAEL007190	I	0.000
ENSAMEG00000008835	Ailuropoda melanoleuca	ENSAMEG00000008835	I	0.000
Alligator_sinensis_CCG020979.1	Alligator sinensis	Alligator_sinensis_CCG020979.1	I	0.000
ANCCAN_05510	Ancylostoma caninum	ANCCAN_05510	I	0.000
ANCCEY_01724	Ancylostoma ceylanicum	ANCCEY_01724	I	0.000
ASIM_0001387401	Anisakis simplex	ASIM_0001387401	N	0.000
NR2E3	Anolis carolinensis	ENSACAG00000011910	I	0.000
AALB001133	Anopheles albimanus	AALB001133	I	0.000
AARA003887	Anopheles arabiensis	AARA003887	I	0.000
AATE003142	Anopheles atroparvus	AATE003142	I	0.000
ACOM026748	Anopheles coluzzii	ACOM026748	I	0.000
ADAC006988	Anopheles darlingi	ADAC006988	I	0.000
AEPI011067	Anopheles epiroticus	AEPI011067	I	0.000
AFAF011447	Anopheles farauti	AFAF011447	I	0.000
AMEM000983	Anopheles merus	AMEM000983	I	0.000
GB49738	Apis mellifera	GB49738	I	0.000
Afo_R007066	Aptenodytes forsteri	Afo_R007066	I	0.000
ASU_07884	Ascaris suum	ASU_07884	I	0.000
ENSAMXG00000017872	Astyanax mexicanus	ENSAMXG00000017872	I	0.000
BGLB004019	Biomphalaria glabrata	BGLB004019	I	0.000
ENSBTAP00000048604-D1	Bos grunniens	ENSBTAP00000048604-D1	I	0.000
NR2E3	Bos taurus	ENSBTAG00000014236	I	0.000
e_gw.324.28.1	Branchiostoma floridae	e_gw.324.28.1	I	0.000
e_gw.107.44.1	Branchiostoma floridae	e_gw.107.44.1	I	0.000
Bm4485	Brugia malayi	Bm4485	I	0.000
BTMF_0001091401	Brugia timori	BTMF_0001091401	I	0.000
BXY_0327700	Bursaphelenchus xylophilus	BXY_0327700	I	0.000
CBN22518	Caenorhabditis brenneri	CBN22518	I	0.000
CBG14155	Caenorhabditis briggsae	CBG14155	I	0.000
fax-1	Caenorhabditis elegans	WBGene00001400	I	0.000
CJA07370	Caenorhabditis japonica	CJA07370	I	0.000
CRE00427	Caenorhabditis remanei	CRE00427	I	0.000
NR2E3	Callithrix jacchus	ENSCJAG00000018552	I	0.000
Aan_R004022	Calypte anna	Aan_R004022	I	0.000
CapteG171557	Capitella teleta	CapteG171557	I	0.000
NR2E3	Cavia porcellus	ENSCPOG00000008974	I	0.000
Cmyd_10012017	Chelonia mydas	Cmyd_10012017	I	0.000
ENSCSAG00000013721	Chlorocebus sabaeus	ENSCSAG00000013721	I	0.000
csin100859	Clonorchis sinensis	csin100859	I	0.000
CGI_10007932	Crassostrea gigas	CGI_10007932	I	0.000
CGOC_0000187501	Cylicostephanus goldi	CGOC_0000187501	I	0.000
nr2e3	Danio rerio	ENSDARG00000045904	I	0.000
DAPPUDRAFT_106791	Daphnia pulex	DAPPUDRAFT_106791	I	0.000
DICVIV_11193	Dictyocaulus viviparus	DICVIV_11193	I	0.000
nDi.2.2.2.g10236	Dirofilaria immitis	nDi.2.2.2.g10236	I	0.000
GF13031	Drosophila ananassae	FBgn0090064	I	0.000
GH20426	Drosophila grimshawi	FBgn0127889	I	0.000
Hr51	Drosophila melanogaster	FBgn0034012	D	0.000
GI19610	Drosophila mojavensis	FBgn0142347	I	0.000
GL17752	Drosophila persimilis	FBgn0155355	I	0.000
GA30480	Drosophila pseudoobscura	FBgn0264774	D	0.000
GD11109	Drosophila simulans	FBgn0182865	I	0.000
GJ14974	Drosophila virilis	FBgn0202177	I	0.000
GK20892	Drosophila willistoni	FBgn0222886	I	0.000
GE13645	Drosophila yakuba	FBgn0231304	I	0.000
ECPE_0000243601	Echinostoma caproni	ECPE_0000243601	I	0.000
EVEC_0000564801	Enterobius vermicularis	EVEC_0000564801	I	0.000
NR2E3	Equus caballus	ENSECAG00000015192	I	0.000
NR2E3	Felis catus	ENSFCAG00000031082	I	0.000
ENSFALG00000009699	Ficedula albicollis	ENSFALG00000009699	I	0.000
ENSGMOG00000008342	Gadus morhua	ENSGMOG00000008342	I	0.000
ENSGMOG00000019194	Gadus morhua	ENSGMOG00000019194	I	0.000
NR2E3	Gallus gallus	ENSGALG00000002093	I	0.000
nr2e3	Gasterosteus aculeatus	ENSGACG00000004739	I	0.000
NR2E3	Gasterosteus aculeatus	ENSGACG00000017060	I	0.000
Gfo_R008863	Geospiza fortis	Gfo_R008863	I	0.000
GPLIN_000669800	Globodera pallida	GPLIN_000669800	I	0.000
NR2E3	Gorilla gorilla	ENSGGOG00000004383	I	0.000
HCOI01781300	Haemonchus contortus	HCOI01781300	I	0.000
HHAL007294-PA	Halyomorpha halys	HHAL007294-PA	I	0.000
Hsal_07902--XP_396999.3_APIME	Harpegnathos saltator	Hsal_07902--XP_396999.3_APIME	I	0.000
HelroG139475	Helobdella robusta	HelroG139475	I	0.000
Hba_15323	Heterorhabditis bacteriophora	Hba_15323	I	0.000
NR2E3	Homo sapiens	ENSG00000278570	D	0.000
ENSSTOG00000012080	Ictidomys tridecemlineatus	ENSSTOG00000012080	I	0.000
ISCW010891	Ixodes scapularis	ISCW010891	I	0.000
ISCW019467	Ixodes scapularis	ISCW019467	I	0.000
ENSLACG00000022378	Latimeria chalumnae	ENSLACG00000022378	I	0.000
ENSLOCG00000014973	Lepisosteus oculatus	ENSLOCG00000014973	I	0.000
LDEC022044	Leptinotarsa decemlineata	LDEC022044	I	0.000
LOAG_06205	Loa loa	LOAG_06205	I	0.000
LotgiG137595	Lottia gigantea	LotgiG137595	I	0.000
NR2E3	Macaca mulatta	ENSMMUG00000019276	I	0.000
ENSMEUG00000016597	Macropus eugenii	ENSMEUG00000016597	I	0.000
NR2E3	Meleagris gallopavo	ENSMGAG00000001449	I	0.000
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1	Meloidogyne floridensis	snap_masked-nMf.1.1.scaf29070-processed-gene-0.1	I	0.000
genemark-nMf.1.1.scaf00188-processed-gene-0.4	Meloidogyne floridensis	genemark-nMf.1.1.scaf00188-processed-gene-0.4	I	0.000
MhA1_Contig1792.frz3.gene6	Meloidogyne hapla	MhA1_Contig1792.frz3.gene6	I	0.000
NR2E3	Monodelphis domestica	ENSMODG00000001949	I	0.000
MDOA010244	Musca domestica	MDOA010244	I	0.000
ENSMPUG00000017103	Mustela putorius furo	ENSMPUG00000017103	I	0.000
Nr2e3	Mus musculus	ENSMUSG00000032292	D	0.000
Myotis_brandtii_NR2E3_10027281	Myotis brandtii	Myotis_brandtii_NR2E3_10027281	I	0.000
NR2E3	Myotis lucifugus	ENSMLUG00000008408	I	0.000
NV14480	Nasonia vitripennis	NV14480	I	0.000
NEMVEDRAFT_v1g169225	Nematostella vectensis	NEMVEDRAFT_v1g169225	I	0.000
ENSNLEG00000013807	Nomascus leucogenys	ENSNLEG00000013807	I	0.000
NR2E3	Ochotona princeps	ENSOPRG00000006427	I	0.000
OESDEN_00114	Oesophagostomum dentatum	OESDEN_00114	I	0.000
OFLC_0000991001	Onchocerca flexuosa	OFLC_0000991001	I	0.000
nOo.2.0.1.g01040	Onchocerca ochengi	nOo.2.0.1.g01040	I	0.000
nOo.2.0.1.g10097	Onchocerca ochengi	nOo.2.0.1.g10097	I	0.000
nOo.2.0.1.g11611	Onchocerca ochengi	nOo.2.0.1.g11611	I	0.000
WBGene00240517	Onchocerca volvulus	WBGene00240517	I	0.000
Ogr12843	Ophisaurus gracilis	Ogr12843	I	0.000
ENSONIG00000007109	Oreochromis niloticus	ENSONIG00000007109	I	0.000
ENSONIG00000015396	Oreochromis niloticus	ENSONIG00000015396	I	0.000
NR2E3	Oryzias latipes	ENSORLG00000000011	I	0.000
nr2e3	Oryzias latipes	ENSORLG00000007175	I	0.000
NR2E3	Otolemur garnettii	ENSOGAG00000006128	I	0.000
ENSOARG00000018808	Ovis aries	ENSOARG00000018808	I	0.000
NR2E3	Pan troglodytes	ENSPTRG00000007242	I	0.000
ENSPANG00000016257	Papio anubis	ENSPANG00000016257	I	0.000
PTRK_0000446300	Parastrongyloides trichosuri	PTRK_0000446300	I	0.000
PHUM039420	Pediculus humanus	PHUM039420	I	0.000
PHUM331460	Pediculus humanus	PHUM331460	I	0.000
ENSPMAG00000009792	Petromyzon marinus	ENSPMAG00000009792	I	0.000
ENSPFOG00000006516	Poecilia formosa	ENSPFOG00000006516	I	0.000
ENSPFOG00000006106	Poecilia formosa	ENSPFOG00000006106	I	0.000
Pvit_13689	Pogona vitticeps	Pvit_13689	I	0.000
scaffold296-EXSNAP2012.8	Pristionchus exspectatus	scaffold296-EXSNAP2012.8	I	0.000
scaffold395-EXSNAP2012.23	Pristionchus exspectatus	scaffold395-EXSNAP2012.23	I	0.000
Ppa-fax-1	Pristionchus pacificus	PPA00264	I	0.000
Ppa-nhr-3	Pristionchus pacificus	PPA28597	I	0.000
NR2E3	Procavia capensis	ENSPCAG00000014733	I	0.000
NR2E3	Pteropus vampyrus	ENSPVAG00000009088	I	0.000
Nr2e3	Rattus norvegicus	ENSRNOG00000050690	I	0.000
RSKR_0000698500	Rhabditophanes kr3021	RSKR_0000698500	I	0.000
RPRC002557	Rhodnius prolixus	RPRC002557	I	0.000
Sakowv30007027m.g	Saccoglossus kowalevskii	Sakowv30007027m.g	I	0.000
Smp_167770	Schistosoma mansoni	Smp_167770	I	0.000
SMRZ_0000841101	Schistosoma margrebowiei	SMRZ_0000841101	I	0.000
SMTD_0001566201	Schistosoma mattheei	SMTD_0001566201	I	0.000
SMU15038222	Schmidtea mediterranea	SMU15038222	I	0.000
SMU15029049	Schmidtea mediterranea	SMU15029049	I	0.000
SBAD_0000006401	Soboliphyme baturini	SBAD_0000006401	I	0.000
L596_g2163	Steinernema carpocapsae	L596_g2163	I	0.000
L889_g11978	Steinernema feltiae	L889_g11978	I	0.000
L893_g28297	Steinernema glaseri	L893_g28297	I	0.000
L898_g15355	Steinernema monticolum	L898_g15355	I	0.000
L892_g9366	Steinernema scapterisci	L892_g9366	I	0.000
SMAR006008	Strigamia maritima	SMAR006008	I	0.000
SMAR005628	Strigamia maritima	SMAR005628	I	0.000
SPU_014405	Strongylocentrotus purpuratus	SPU_014405	I	0.000
SPAL_0001117000	Strongyloides papillosus	SPAL_0001117000	I	0.000
SSTP_0000090600	Strongyloides stercoralis	SSTP_0000090600	I	0.000
SVE_0933400	Strongyloides venezuelensis	SVE_0933400	I	0.000
NR2E3	Sus scrofa	ENSSSCG00000004978	I	0.000
SMUV_0000245701	Syphacia muris	SMUV_0000245701	I	0.000
ENSTGUG00000004498	Taeniopygia guttata	ENSTGUG00000004498	I	0.000
NR2E3	Takifugu rubripes	ENSTRUG00000015582	I	0.000
TELCIR_21617	Teladorsagia circumcincta	TELCIR_21617	I	0.000
tetur01g11040	Tetranychus urticae	tetur01g11040	I	0.000
tetur08g01210	Tetranychus urticae	tetur08g01210	I	0.000
NR2E3	Tetraodon nigroviridis	ENSTNIG00000005150	I	0.000
TCLT_0000456401	Thelazia callipaeda	TCLT_0000456401	I	0.000
TCNE_0001716001	Toxocara canis	TCNE_0001716001	I	0.000
TC009378	Tribolium castaneum	TC009378	I	0.000
D917_05007	Trichinella nativa	D917_05007	I	0.000
EFV56045	Trichinella spiralis	EFV56045	I	0.000
TRE_0000223201	Trichobilharzia regenti	TRE_0000223201	I	0.000
D918_07443	Trichuris suis	D918_07443	I	0.000
TTRE_0000600201	Trichuris trichiura	TTRE_0000600201	I	0.000
NR2E3	Tupaia belangeri	ENSTBEG00000011672	I	0.000
NR2E3	Tursiops truncatus	ENSTTRG00000009410	I	0.000
WUBG_05086	Wuchereria bancrofti	WUBG_05086	I	0.000
nr2e3	Xenopus tropicalis	XB-GENE-485801	I	0.000
ENSXMAG00000010311	Xiphophorus maculatus	ENSXMAG00000010311	I	0.000
ENSXMAG00000015842	Xiphophorus maculatus	ENSXMAG00000015842	I	0.000
L798_02234	Zootermopsis nevadensis	L798_02234	I	0.000

ORGLA06G0292200 (Oryza glaberrima) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1792 Related TFs

ORGLA06G0292200 **(Oryza glaberrima)
WRKY**