Cucsa.388650 (Cucumis sativus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cucsa.388650 T355628_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.894 0.932
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.894 0.932
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.894 0.932
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.875 0.864
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.874 0.847
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.874 0.847
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.874 0.847
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.873 0.864
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.873 0.864
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.873 0.864
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.870 0.831
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.870 0.831
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.870 0.831
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.866 0.814
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.866 0.814
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.863 0.678
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.863 0.678
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.860 0.678
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.860 0.678
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.860 0.678
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.859 0.661
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.859 0.661
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.859 0.661
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.857 0.678
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.857 0.678
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.857 0.678
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.843 0.610
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.843 0.610
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.843 0.610
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.829 0.542
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.828 0.593
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.827 0.559
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.826 0.542
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.826 0.542
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.826 0.525
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.826 0.525
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.826 0.525
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.820 0.610
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.816 0.525
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.814 0.508
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.814 0.508
WRKY59
M07382_2.00
Arabidopsis thaliana
NDWWAGTCAAMN

NKTTGACTWWHN
Dap-seq
OMalley et al.(2016)
WRKY59_col_a
0.814 0.559
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN

NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.812 0.492
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH

DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.812 0.492
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.388650.1 WRKY 285 343
Cucsa.388650.2 WRKY 188 246
Cucsa.388650.3 WRKY 188 246

Links

Other WRKY family TFs
Other Cucumis sativus TFs

1820 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29682.m000576 Ricinus communis 29682.m000576 I 0.000
30162.m001290 Ricinus communis 30162.m001290 I 0.000
30170.m013806 Ricinus communis 30170.m013806 I 0.000
AMTR_s00022p00128600 Amborella trichopoda AMTR_s00022p00128600 I 0.000
Aquca_007_00955 Aquilegia coerulea Aquca_007_00955 I 0.000
ARID3 Arabidopsis thaliana AT2G17410 D 0.000
ARID6 Arabidopsis thaliana AT1G20910 D 0.000
AT1G76510 Arabidopsis thaliana AT1G76510 I 0.000
BGIOSGA005739 Oryza indica BGIOSGA005739 I 0.000
BGIOSGA023283 Oryza indica BGIOSGA023283 I 0.000
Bo5g030830 Brassica oleracea Bo5g030830 I 0.000
Bo6g120610 Brassica oleracea Bo6g120610 I 0.000
Bo7g014510 Brassica oleracea Bo7g014510 I 0.000
Bo7g061260 Brassica oleracea Bo7g061260 I 0.000
Bo8g070520 Brassica oleracea Bo8g070520 I 0.000
Bo9g024490 Brassica oleracea Bo9g024490 I 0.000
Bostr.18351s0201 Boechera stricta Bostr.18351s0201 I 0.000
Bostr.20129s0090 Boechera stricta Bostr.20129s0090 I 0.000
Bostr.7128s0681 Boechera stricta Bostr.7128s0681 I 0.000
Bra002058 Brassica rapa Bra002058 I 0.000
Bra012257 Brassica rapa Bra012257 I 0.000
Bra016443 Brassica rapa Bra016443 I 0.000
Bra025855 Brassica rapa Bra025855 I 0.000
Bra037275 Brassica rapa Bra037275 I 0.000
BRADI1G55550 Brachypodium distachyon BRADI1G55550 I 0.000
BRADI3G53270 Brachypodium distachyon BRADI3G53270 I 0.000
Cagra.2281s0033 Capsella grandiflora Cagra.2281s0033 I 0.000
Cagra.6160s0006 Capsella grandiflora Cagra.6160s0006 I 0.000
Cagra.6788s0003 Capsella grandiflora Cagra.6788s0003 I 0.000
Carubv10009301m.g Capsella rubella Carubv10009301m.g I 0.000
Carubv10012979m.g Capsella rubella Carubv10012979m.g I 0.000
Carubv10020299m.g Capsella rubella Carubv10020299m.g I 0.000
cassava23401.valid.m1 Manihot esculenta cassava23401.valid.m1 I 0.000
cassava24840.valid.m1 Manihot esculenta cassava24840.valid.m1 I 0.000
cassava27165.m1 Manihot esculenta cassava27165.m1 I 0.000
Ca_04797 Cicer arietinum Ca_04797 I 0.000
Ca_10698 Cicer arietinum Ca_10698 I 0.000
chr1.CM0150.370.nc Lotus japonicus chr1.CM0150.370.nc I 0.000
Ciclev10001099m.g Citrus clementina Ciclev10001099m.g I 0.000
Ciclev10025351m.g Citrus clementina Ciclev10025351m.g I 0.000
Ciclev10030351m.g Citrus clementina Ciclev10030351m.g I 0.000
Cla009111 Citrullus lanatus Cla009111 I 0.000
Cucsa.323280 Cucumis sativus Cucsa.323280 I 0.000
Eucgr.F01815 Eucalyptus grandis Eucgr.F01815 I 0.000
Eucgr.I01546 Eucalyptus grandis Eucgr.I01546 I 0.000
Eucgr.I02198 Eucalyptus grandis Eucgr.I02198 I 0.000
evm.TU.supercontig_26.2 Carica papaya evm.TU.supercontig_26.2 I 0.000
e_gw1.66.61.1 Physcomitrella patens e_gw1.66.61.1 I 0.000
F775_06069 Aegilops tauschii F775_06069 I 0.000
fgenesh2_kg.1__2281__AT1G20910.1 Arabidopsis lyrata fgenesh2_kg.1__2281__AT1G20910.1 I 0.000
fgenesh2_kg.2__1939__AT1G76510.1 Arabidopsis lyrata fgenesh2_kg.2__1939__AT1G76510.1 I 0.000
fgenesh2_kg.3__3325__AT2G17410.1 Arabidopsis lyrata fgenesh2_kg.3__3325__AT2G17410.1 I 0.000
gene12982-v1.0-hybrid Fragaria vesca gene12982-v1.0-hybrid I 0.000
gene17116-v1.0-hybrid Fragaria vesca gene17116-v1.0-hybrid I 0.000
GL50803_17540 Giardia lamblia GL50803_17540 I 0.000
GLYMA01G36040 Glycine max GLYMA01G36040 I 0.000
GLYMA04G01560 Glycine max GLYMA04G01560 I 0.000
GLYMA05G10756 Glycine max GLYMA05G10756 I 0.000
GLYMA06G01640 Glycine max GLYMA06G01640 I 0.000
GLYMA09G32820 Glycine max GLYMA09G32820 I 0.000
GLYMA11G09370 Glycine max GLYMA11G09370 I 0.000
GLYMA16G21840 Glycine max GLYMA16G21840 I 0.000
Gorai.002G112400 Gossypium raimondii Gorai.002G112400 I 0.000
Gorai.003G000800 Gossypium raimondii Gorai.003G000800 I 0.000
Gorai.012G137700 Gossypium raimondii Gorai.012G137700 I 0.000
GRMZM2G110109 Zea mays GRMZM2G110109 I 0.000
GRMZM2G180654 Zea mays GRMZM2G180654 I 0.000
GRMZM2G421899 Zea mays GRMZM2G421899 I 0.000
GRMZM5G883993 Zea mays GRMZM5G883993 I 0.000
GSMUA_Achr3G11660_001 Musa acuminata GSMUA_Achr3G11660_001 I 0.000
GSMUA_Achr4G19240_001 Musa acuminata GSMUA_Achr4G19240_001 I 0.000
GSMUA_AchrUn_randomG12940_001 Musa acuminata GSMUA_AchrUn_randomG12940_001 I 0.000
gw1.131.40.1 Physcomitrella patens gw1.131.40.1 I 0.000
IGS.gm_25_00027 Chlorella NC64A IGS.gm_25_00027 N 0.000
ISCW014189 Ixodes scapularis ISCW014189 I 0.000
LPERR02G24480 Leersia perrieri LPERR02G24480 I 0.000
LPERR06G17780 Leersia perrieri LPERR06G17780 I 0.000
Lus10001618.g Linum usitatissimum Lus10001618.g I 0.000
Lus10016045.g Linum usitatissimum Lus10016045.g I 0.000
Lus10022981.g Linum usitatissimum Lus10022981.g I 0.000
MDP0000188323 Malus domestica MDP0000188323 I 0.000
MDP0000834789 Malus domestica MDP0000834789 I 0.000
MDP0000890776 Malus domestica MDP0000890776 I 0.000
mg023226m Mimulus guttatus mg023226m I 0.000
mgf001698m Mimulus guttatus mgf001698m I 0.000
mgf002691m Mimulus guttatus mgf002691m I 0.000
mgf005009m Mimulus guttatus mgf005009m I 0.000
mgf014392m Mimulus guttatus mgf014392m I 0.000
MTR_3g116200 Medicago truncatula MTR_3g116200 I 0.000
MTR_5g024920 Medicago truncatula MTR_5g024920 I 0.000
OB02G37240 Oryza brachyantha OB02G37240 I 0.000
OB06G29250 Oryza brachyantha OB06G29250 I 0.000
OBART02G30070 Oryza barthii OBART02G30070 I 0.000
OBART06G21220 Oryza barthii OBART06G21220 I 0.000
OGLUM02G30740 Oryza glumaepatula OGLUM02G30740 I 0.000
OGLUM06G22430 Oryza glumaepatula OGLUM06G22430 I 0.000
OLONG_022248 Oryza longistaminata OLONG_022248 I 0.000
OMERI01G31330 Oryza meridionalis OMERI01G31330 I 0.000
OMERI02G28920 Oryza meridionalis OMERI02G28920 I 0.000
ONIVA02G32840 Oryza nivara ONIVA02G32840 I 0.000
ONIVA06G25180 Oryza nivara ONIVA06G25180 I 0.000
OPUNC02G27630 Oryza punctata OPUNC02G27630 I 0.000
OPUNC06G19340 Oryza punctata OPUNC06G19340 I 0.000
orange1.1g004663m.g Citrus sinensis orange1.1g004663m.g I 0.000
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.000
orange1.1g012780m.g Citrus sinensis orange1.1g012780m.g I 0.000
ORGLA02G0256100 Oryza glaberrima ORGLA02G0256100 I 0.000
ORUFI02G31730 Oryza rufipogon ORUFI02G31730 I 0.000
ORUFI06G22870 Oryza rufipogon ORUFI06G22870 I 0.000
OS02G0714300 Oryza sativa OS02G0714300 I 0.000
OS06G0622300 Oryza sativa OS06G0622300 I 0.000
Pavir.Aa00633 Panicum virgatum Pavir.Aa00633 I 0.000
Pavir.Ab03084 Panicum virgatum Pavir.Ab03084 I 0.000
Pavir.Db00824 Panicum virgatum Pavir.Db00824 I 0.000
PDK_20s1315201g001 Phoenix dactylifera PDK_20s1315201g001 I 0.000
PDK_20s1326081g004 Phoenix dactylifera PDK_20s1326081g004 I 0.000
PGSC0003DMG400010001 Solanum tuberosum PGSC0003DMG400010001 I 0.000
PGSC0003DMG400021771 Solanum tuberosum PGSC0003DMG400021771 I 0.000
PK02181.1 Cannabis sativa PK02181.1 I 0.000
PK12537.1 Cannabis sativa PK12537.1 I 0.000
Pm020703 Prunus mume Pm020703 I 0.000
Pm022898 Prunus mume Pm022898 I 0.000
Pm026967 Prunus mume Pm026967 I 0.000
POPTR_0001s46070 Populus trichocarpa POPTR_0001s46070 I 0.000
POPTR_0002s00550 Populus trichocarpa POPTR_0002s00550 I 0.000
POPTR_0004s21870 Populus trichocarpa POPTR_0004s21870 I 0.000
POPTR_0011s14850 Populus trichocarpa POPTR_0011s14850 I 0.000
PRUPE_ppa001071mg Prunus persica PRUPE_ppa001071mg I 0.000
PRUPE_ppa003469mg Prunus persica PRUPE_ppa003469mg I 0.000
PRUPE_ppa006712mg Prunus persica PRUPE_ppa006712mg I 0.000
SapurV1A.0016s0160 Salix purpurea SapurV1A.0016s0160 I 0.000
SapurV1A.0047s0480 Salix purpurea SapurV1A.0047s0480 I 0.000
SapurV1A.0478s0090 Salix purpurea SapurV1A.0478s0090 I 0.000
SapurV1A.0554s0250 Salix purpurea SapurV1A.0554s0250 I 0.000
Sb04g029990 Sorghum bicolor Sb04g029990 I 0.000
Sb10g024400 Sorghum bicolor Sb10g024400 I 0.000
SELMODRAFT_271464 Selaginella moellendorffii SELMODRAFT_271464 I 0.000
SELMODRAFT_445202 Selaginella moellendorffii SELMODRAFT_445202 I 0.000
Si006372m.g Setaria italica Si006372m.g I 0.000
Si017073m.g Setaria italica Si017073m.g I 0.000
SMAR003184 Strigamia maritima SMAR003184 I 0.000
SMAR006121 Strigamia maritima SMAR006121 I 0.000
Solyc04g082820.2 Solanum lycopersicum Solyc04g082820.2 I 0.000
Solyc12g094730.1 Solanum lycopersicum Solyc12g094730.1 I 0.000
TCM_007605 Theobroma cacao TCM_007605 I 0.000
TCM_034809 Theobroma cacao TCM_034809 I 0.000
Thhalv10007750m.g Eutrema salsugineum Thhalv10007750m.g I 0.000
Thhalv10018578m.g Eutrema salsugineum Thhalv10018578m.g I 0.000
Thhalv10022553m.g Eutrema salsugineum Thhalv10022553m.g I 0.000
Traes_2AS_49D6010DA1 Triticum aestivum Traes_2AS_49D6010DA1 I 0.000
Traes_2BS_B3411790F Triticum aestivum Traes_2BS_B3411790F I 0.000
Traes_2DL_C465ACBE4 Triticum aestivum Traes_2DL_C465ACBE4 I 0.000
Traes_6AL_D304A3C3B Triticum aestivum Traes_6AL_D304A3C3B I 0.000
Traes_6BL_936B5B999 Triticum aestivum Traes_6BL_936B5B999 I 0.000
Traes_6DL_E6E385C31 Triticum aestivum Traes_6DL_E6E385C31 I 0.000
TRIUR3_34317 Triticum urartu TRIUR3_34317 I 0.000
VIT_04s0044g01840 Vitis vinifera VIT_04s0044g01840 I 0.000
VIT_18s0122g00560 Vitis vinifera VIT_18s0122g00560 I 0.000