VDBG_02744 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_02744 T357966_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
clr-2
M01429_2.00 		Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN		 PBM
Lambert et al.(2019)
pTH11853 		0.552 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_02744T0 Zinc cluster 34 73

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_02744 Verticillium alfalfae VDBG_02744 I 0.683
VDAG_03660 Verticillium dahliae VDAG_03660 I 0.683
ACRE_069340 Acremonium chrysogenum ACRE_069340 I 0.582
S40288_04438 Stachybotrys chartarum S40288_04438 I 0.552
S40285_05006 Stachybotrys chlorohalonata S40285_05006 I 0.552
PODANS_6_1990 Podospora anserina PODANS_6_1990 I 0.552
SMAC_03793 Sordaria macrospora SMAC_03793 I 0.552
VDAG_00390 Verticillium dahliae VDAG_00390 I 0.552
e_gw1.3.2553.1 Cryphonectria parasitica e_gw1.3.2553.1 I 0.552
clr-2 Neurospora crassa NCU08042 D 0.552
fgenesh3_pm.C_scaffold_3000122 Neurospora discreta fgenesh3_pm.C_scaffold_3000122 I 0.552
PFICI_05693 Pestalotiopsis fici PFICI_05693 I 0.552
THITE_2128774 Thielavia terrestris THITE_2128774 I 0.552
NEUTE1DRAFT_99711 Neurospora tetrasperma NEUTE1DRAFT_99711 I 0.552
CSUB01_07131 Colletotrichum sublineola CSUB01_07131 I 0.552
CH063_04960 Colletotrichum higginsianum CH063_04960 I 0.552
CGGC5_12972 Colletotrichum gloeosporioides CGGC5_12972 I 0.552
CFIO01_00502 Colletotrichum fioriniae CFIO01_00502 I 0.552
CTHT_0033840 Chaetomium thermophilum CTHT_0033840 I 0.552
F503_04469 Ophiostoma piceae uamh F503_04469 I 0.552
MAPG_04988 Magnaporthe poae MAPG_04988 I 0.552
HMPREF1624_07333 Sporothrix schenckii HMPREF1624_07333 I 0.552
GLRG_08292 Colletotrichum graminicola GLRG_08292 I 0.552
GGTG_08810 Gaeumannomyces graminis GGTG_08810 I 0.552
MGG_01833 Magnaporthe oryzae MGG_01833 I 0.552